Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU6-439P-201ENST00000384188 106 ntBASIC1.42□□□□□ -2.18
CASP4P49662 MIR520A-201ENST00000384862 85 ntBASIC1.42□□□□□ -2.18
CASP4P49662 MIR1267-201ENST00000408723 78 ntBASIC1.42□□□□□ -2.18
CASP4P49662 USP9YP28-201ENST00000435142 589 ntBASIC1.42□□□□□ -2.18
CASP4P49662 UBE2V1P8-201ENST00000437166 265 ntBASIC1.42□□□□□ -2.18
CASP4P49662 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.42□□□□□ -2.18
CASP4P49662 RPL9P9-202ENST00000466501 579 ntBASIC1.42□□□□□ -2.18
CASP4P49662 RPL36AP21-201ENST00000490372 323 ntBASIC1.42□□□□□ -2.18
CASP4P49662 SNORA19.2-201ENST00000516013 114 ntBASIC1.42□□□□□ -2.18
CASP4P49662 RNU6-1038P-201ENST00000516516 104 ntBASIC1.42□□□□□ -2.18
CASP4P49662 AC025423.5-201ENST00000550230 219 ntBASIC1.42□□□□□ -2.18
CASP4P49662 SCOCP1-201ENST00000554676 349 ntBASIC1.42□□□□□ -2.18
CASP4P49662 HMGB1P33-201ENST00000563485 527 ntBASIC1.42□□□□□ -2.18
CASP4P49662 AP005136.1-201ENST00000579765 429 ntBASIC1.42□□□□□ -2.18
CASP4P49662 MIR5692C1-201ENST00000585309 91 ntBASIC1.42□□□□□ -2.18
CASP4P49662 AC064836.2-201ENST00000609491 462 ntBASIC1.42□□□□□ -2.18
CASP4P49662 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CASP4P49662 Y_RNA.67-201ENST00000362870 100 ntBASIC1.41□□□□□ -2.18
CASP4P49662 RNU4-20P-201ENST00000365601 151 ntBASIC1.41□□□□□ -2.18
CASP4P49662 RNU6-296P-201ENST00000384608 107 ntBASIC1.41□□□□□ -2.18
CASP4P49662 RPS26P42-201ENST00000413485 326 ntBASIC1.41□□□□□ -2.18
CASP4P49662 TIMM9P3-201ENST00000428659 274 ntBASIC1.41□□□□□ -2.18
CASP4P49662 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.41□□□□□ -2.18
CASP4P49662 AL359672.1-201ENST00000442302 409 ntBASIC1.41□□□□□ -2.18
CASP4P49662 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
CASP4P49662 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
CASP4P49662 RNU6-1208P-201ENST00000459588 107 ntBASIC1.41□□□□□ -2.18
CASP4P49662 AC010531.2-201ENST00000465012 153 ntBASIC1.41□□□□□ -2.18
CASP4P49662 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.41□□□□□ -2.18
CASP4P49662 RNU2-34P-201ENST00000516534 121 ntBASIC1.41□□□□□ -2.18
CASP4P49662 RNU6-835P-201ENST00000516974 104 ntBASIC1.41□□□□□ -2.18
CASP4P49662 MTND2P38-201ENST00000522536 667 ntBASIC1.41□□□□□ -2.18
CASP4P49662 AC104576.1-201ENST00000524225 88 ntBASIC1.41□□□□□ -2.18
CASP4P49662 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.41□□□□□ -2.18
CASP4P49662 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
CASP4P49662 AC092807.2-201ENST00000609367 243 ntBASIC1.41□□□□□ -2.18
CASP4P49662 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CASP4P49662 MIR6863-201ENST00000636112 90 ntBASIC1.41□□□□□ -2.18
CASP4P49662 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CASP4P49662 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CASP4P49662 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CASP4P49662 RNU6-1085P-201ENST00000363576 107 ntBASIC1.4□□□□□ -2.19
CASP4P49662 SNORA7.1-201ENST00000363750 139 ntBASIC1.4□□□□□ -2.19
CASP4P49662 Y_RNA.409-201ENST00000383990 98 ntBASIC1.4□□□□□ -2.19
CASP4P49662 RNU6-259P-201ENST00000383999 107 ntBASIC1.4□□□□□ -2.19
CASP4P49662 MIR514A2-201ENST00000385131 88 ntBASIC1.4□□□□□ -2.19
CASP4P49662 MIR514A3-201ENST00000385132 88 ntBASIC1.4□□□□□ -2.19
CASP4P49662 MTND3P9-201ENST00000429526 346 ntBASIC1.4□□□□□ -2.19
CASP4P49662 AC069257.2-201ENST00000441819 155 ntBASIC1.4□□□□□ -2.19
CASP4P49662 SRRM1P2-201ENST00000464531 1192 ntBASIC1.4□□□□□ -2.19
CASP4P49662 RNA5SP481-201ENST00000516814 122 ntBASIC1.4□□□□□ -2.19
CASP4P49662 RNU6-856P-201ENST00000516959 98 ntBASIC1.4□□□□□ -2.19
CASP4P49662 MTND1P15-201ENST00000579262 949 ntBASIC1.4□□□□□ -2.19
CASP4P49662 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
CASP4P49662 AL121757.2-201ENST00000611223 313 ntBASIC1.4□□□□□ -2.19
CASP4P49662 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.4□□□□□ -2.19
CASP4P49662 FER-210ENST00000628534 558 ntTSL 5 BASIC1.4□□□□□ -2.19
CASP4P49662 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
CASP4P49662 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
CASP4P49662 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CASP4P49662 RNU5B-2P-201ENST00000363036 113 ntBASIC1.39□□□□□ -2.19
CASP4P49662 RNU6-1019P-201ENST00000364424 107 ntBASIC1.39□□□□□ -2.19
CASP4P49662 RNU6-1317P-201ENST00000364582 104 ntBASIC1.39□□□□□ -2.19
CASP4P49662 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
CASP4P49662 SNORD116-1-201ENST00000384335 95 ntBASIC1.39□□□□□ -2.19
CASP4P49662 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CASP4P49662 RNU6-360P-201ENST00000390944 104 ntBASIC1.39□□□□□ -2.19
CASP4P49662 EIF4E2P1-201ENST00000393781 255 ntBASIC1.39□□□□□ -2.19
CASP4P49662 RNU6-648P-201ENST00000410190 107 ntBASIC1.39□□□□□ -2.19
CASP4P49662 RNU2-7P-201ENST00000410794 178 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.39□□□□□ -2.19
CASP4P49662 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.39□□□□□ -2.19
CASP4P49662 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.39□□□□□ -2.19
CASP4P49662 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.39□□□□□ -2.19
CASP4P49662 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.39□□□□□ -2.19
CASP4P49662 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.39□□□□□ -2.19
CASP4P49662 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.39□□□□□ -2.19
CASP4P49662 snoU13.6-201ENST00000458785 104 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
CASP4P49662 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.39□□□□□ -2.19
CASP4P49662 AC084364.2-201ENST00000546924 395 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AL157687.1-201ENST00000554853 619 ntBASIC1.39□□□□□ -2.19
CASP4P49662 MIR4753-201ENST00000585119 83 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AC104458.1-201ENST00000608243 463 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AC005562.2-201ENST00000618264 111 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AL158209.2-201ENST00000619266 216 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AC068792.1-201ENST00000621354 417 ntBASIC1.39□□□□□ -2.19
CASP4P49662 AC121333.1-201ENST00000567488 2709 ntBASIC1.39□□□□□ -2.19
CASP4P49662 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.38□□□□□ -2.19
CASP4P49662 RNA5SP432-201ENST00000362480 116 ntBASIC1.38□□□□□ -2.19
CASP4P49662 RNU6-1286P-201ENST00000383871 107 ntBASIC1.38□□□□□ -2.19
CASP4P49662 RNU6-214P-201ENST00000384130 107 ntBASIC1.38□□□□□ -2.19
CASP4P49662 SNORA29-201ENST00000384183 140 ntBASIC1.38□□□□□ -2.19
CASP4P49662 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
CASP4P49662 SNORA40.6-201ENST00000391153 128 ntBASIC1.38□□□□□ -2.19
CASP4P49662 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
CASP4P49662 MTCO3P40-201ENST00000392516 676 ntBASIC1.38□□□□□ -2.19
CASP4P49662 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CASP4P49662 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.38□□□□□ -2.19
CASP4P49662 RNU2-66P-201ENST00000410650 161 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms