Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CSNK1A1P48729 AC121333.1-201ENST00000567488 2709 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 RNU6-483P-201ENST00000384088 108 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 EIF4E2P1-201ENST00000393781 255 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 SNRPGP13-201ENST00000442212 177 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 HSPE1P24-201ENST00000450782 238 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 AC016925.1-201ENST00000458303 298 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 RPS29P23-201ENST00000458635 123 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 RPS23P5-201ENST00000495419 428 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 Y_RNA.704-201ENST00000516851 102 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 SNORA31.17-201ENST00000516953 127 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 AC016256.1-201ENST00000547971 354 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 CPDP1-201ENST00000579660 283 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 FER-210ENST00000628534 558 ntTSL 5 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 MTND5P9-201ENST00000503854 1755 ntBASIC1.28□□□□□ -2.2
CSNK1A1P48729 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
CSNK1A1P48729 Y_RNA.41-201ENST00000362646 102 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 Y_RNA.194-201ENST00000363985 102 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 Y_RNA.231-201ENST00000364358 102 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 RNU4-75P-201ENST00000364621 146 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 SNORA18.2-201ENST00000383865 132 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 Y_RNA.559-201ENST00000384686 107 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 RNU6-174P-201ENST00000410406 106 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 RNU6-325P-201ENST00000411132 105 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 ARL5AP1-201ENST00000418991 388 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.27□□□□□ -2.21
CSNK1A1P48729 MRPS10P2-201ENST00000431226 381 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC010531.2-201ENST00000465012 153 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC097473.1-201ENST00000508142 408 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 RNU6-1332P-201ENST00000516666 104 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.27□□□□□ -2.21
CSNK1A1P48729 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC024909.2-201ENST00000553035 286 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC100830.2-201ENST00000581636 240 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.27□□□□□ -2.21
CSNK1A1P48729 RPL17P51-201ENST00000605218 238 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 RMST_3.1-201ENST00000611651 109 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC048344.4-201ENST00000619744 527 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 AC068137.3-201ENST00000639191 341 ntBASIC1.27□□□□□ -2.21
CSNK1A1P48729 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CSNK1A1P48729 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.26□□□□□ -2.21
CSNK1A1P48729 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CSNK1A1P48729 OR4G1P-203ENST00000641984 1631 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 RNU6-545P-201ENST00000362681 104 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 Y_RNA.123-201ENST00000363338 102 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 RNU4-13P-201ENST00000364019 141 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 Y_RNA.372-201ENST00000365599 102 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CSNK1A1P48729 RNU6-908P-201ENST00000410160 94 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 MTCO1P20-201ENST00000425366 358 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.26□□□□□ -2.21
CSNK1A1P48729 ERLEC1P1-201ENST00000433806 578 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 USP9YP28-201ENST00000435142 589 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 AC099677.2-201ENST00000436385 175 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.26□□□□□ -2.21
CSNK1A1P48729 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.26□□□□□ -2.21
CSNK1A1P48729 U8.21-201ENST00000459536 136 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.26□□□□□ -2.21
CSNK1A1P48729 AC015712.3-201ENST00000559380 164 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 SNORA59B-202ENST00000578183 701 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 MIR5094-201ENST00000578766 85 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 AC010525.2-201ENST00000590920 195 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 CTHRC1P1-201ENST00000605383 469 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 PRR13P7-201ENST00000605538 430 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 AC004492.1-201ENST00000607036 742 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 AC104458.1-201ENST00000608243 463 ntBASIC1.26□□□□□ -2.21
CSNK1A1P48729 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CSNK1A1P48729 RNU6-562P-201ENST00000362731 107 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 RNU6-254P-201ENST00000363377 107 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 RNU6-112P-201ENST00000363599 104 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 RNU6-414P-201ENST00000363705 104 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 RNU6-1286P-201ENST00000383871 107 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 RNU6-214P-201ENST00000384130 107 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 RNU6-296P-201ENST00000384608 107 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 MIR549A-201ENST00000385268 96 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 MIR450B-201ENST00000401182 78 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 DLGAP5P1-201ENST00000430307 464 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 FTH1P12-201ENST00000432137 551 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.25□□□□□ -2.21
CSNK1A1P48729 UBE2V1P8-201ENST00000437166 265 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 SEPT14P3-201ENST00000439401 183 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 MTND1P1-201ENST00000445453 368 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 AL732372.2-207ENST00000445840 183 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 SEPT14P2-201ENST00000453405 183 ntBASIC1.25□□□□□ -2.21
CSNK1A1P48729 FO393415.2-201ENST00000480085 343 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms