Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL356055.1-201ENST00000602528 446 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 AC022140.2-201ENST00000623500 188 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX2-1P43699 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX2-1P43699 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NKX2-1P43699 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NKX2-1P43699 Y_RNA.80-201ENST00000362996 102 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 RNU6-99P-201ENST00000364721 107 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 SNORA18.3-201ENST00000384122 132 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 RNU6-378P-201ENST00000384324 107 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 Y_RNA.496-201ENST00000384444 101 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 SRIP3-201ENST00000413200 219 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 EDDM3CP-201ENST00000415977 425 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 RPL23AP50-201ENST00000434149 455 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.04□□□□□ -2.08
NKX2-1P43699 AC245102.2-201ENST00000448956 180 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 AC093852.1-201ENST00000503587 266 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX2-1P43699 ANXA2P1-201ENST00000505539 926 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 SNORA40.14-201ENST00000516543 86 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 Y_RNA.706-201ENST00000516933 99 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 RNU6-667P-201ENST00000517186 102 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NKX2-1P43699 GNAI2P1-201ENST00000541815 315 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 AC090617.3-201ENST00000573670 475 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX2-1P43699 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX2-1P43699 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.04□□□□□ -2.08
NKX2-1P43699 AL355802.3-201ENST00000607571 545 ntBASIC2.04□□□□□ -2.08
NKX2-1P43699 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.04□□□□□ -2.08
NKX2-1P43699 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NKX2-1P43699 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NKX2-1P43699 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.03□□□□□ -2.08
NKX2-1P43699 MIR369-201ENST00000362155 70 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 Y_RNA.138-201ENST00000363462 102 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 MIR144-201ENST00000384886 86 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 MIR32-201ENST00000384965 70 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 MIR9-1-201ENST00000385198 89 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 SNORA48.2-201ENST00000390926 124 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 AL356057.3-201ENST00000402607 340 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 RN7SKP284-201ENST00000411002 343 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 EIF1P2-201ENST00000428233 350 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX2-1P43699 AC011753.1-201ENST00000451001 220 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.03□□□□□ -2.08
NKX2-1P43699 AC091144.1-201ENST00000519573 138 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 CYCSP23-201ENST00000519781 313 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX2-1P43699 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.03□□□□□ -2.08
NKX2-1P43699 MYL12BP1-201ENST00000569826 507 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 AC009127.3-201ENST00000570531 403 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 MIR3200-201ENST00000580767 85 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
NKX2-1P43699 SNRPGP20-201ENST00000604477 205 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.03□□□□□ -2.08
NKX2-1P43699 MIR6895-201ENST00000613497 78 ntBASIC2.03□□□□□ -2.08
NKX2-1P43699 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NKX2-1P43699 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
NKX2-1P43699 RNU6-874P-201ENST00000362390 105 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 RNU1-62P-201ENST00000362599 164 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 RNU1-76P-201ENST00000362903 159 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 RNA5SP456-201ENST00000364002 114 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 Y_RNA.202-201ENST00000364083 110 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 RNU6-280P-201ENST00000364145 104 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 Y_RNA.319-201ENST00000365138 92 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 Y_RNA.422-201ENST00000384054 114 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 RNY1P14-201ENST00000384426 108 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 SNORA69.1-201ENST00000390904 137 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 MIR208B-201ENST00000401172 77 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 Y_RNA.592-201ENST00000410274 109 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 AL135938.1-201ENST00000443141 297 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 IFNA11P-201ENST00000446352 526 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 MTND4P19-201ENST00000446659 478 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 AL137159.1-201ENST00000452808 512 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 AL163540.1-201ENST00000485382 386 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 SNORA25.10-201ENST00000515926 124 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 RNU6-1114P-201ENST00000516022 107 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NKX2-1P43699 PRELID2P1-201ENST00000552837 301 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.02□□□□□ -2.09
NKX2-1P43699 MIR3171-201ENST00000584270 74 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 SNORD14A-201ENST00000606526 91 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 AL606534.2-204ENST00000635008 178 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 MIR203B-201ENST00000636080 86 ntBASIC2.02□□□□□ -2.09
NKX2-1P43699 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NKX2-1P43699 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
NKX2-1P43699 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
NKX2-1P43699 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.01□□□□□ -2.09
NKX2-1P43699 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 Y_RNA.106-201ENST00000363189 100 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 SNORD114-30-201ENST00000364448 72 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 RNU4-42P-201ENST00000364738 142 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 RNU1-91P-201ENST00000364746 163 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 Y_RNA.326-201ENST00000365176 113 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 Y_RNA.445-201ENST00000384168 102 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 RNU6-281P-201ENST00000384212 103 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 SNORA80E-201ENST00000384744 137 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms