Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-85P-201ENST00000605989 107 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AC064836.2-201ENST00000609491 462 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AC109347.2-201ENST00000610220 349 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AL121757.2-201ENST00000611223 313 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AL158209.2-201ENST00000619266 216 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 MIR8063-201ENST00000621930 81 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AC139792.3-201ENST00000623525 224 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AL133216.2-202ENST00000634512 349 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TNFSF9P41273 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TNFSF9P41273 OR4G1P-203ENST00000641984 1631 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU6-271P-201ENST00000363858 105 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 Y_RNA.796-201ENST00000364268 102 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 Y_RNA.255-201ENST00000364581 97 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 Y_RNA.799-201ENST00000364992 102 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 SNORA69-201ENST00000383895 132 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU6-434P-201ENST00000384376 107 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 MIR549A-201ENST00000385268 96 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNA5SP219-201ENST00000390940 113 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU1-78P-201ENST00000391248 165 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU2-29P-201ENST00000410423 189 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU6-1068P-201ENST00000410958 103 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU2-41P-201ENST00000410991 178 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFSF9P41273 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.27□□□□□ -2.21
TNFSF9P41273 AC078809.1-201ENST00000427601 140 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 MTCO1P44-201ENST00000441935 243 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 MTCO2P18-201ENST00000457151 658 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU7-14P-201ENST00000459331 62 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 MTCO3P38-201ENST00000468910 766 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 COX6CP14-201ENST00000469580 174 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 AK3P2-201ENST00000507976 429 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFSF9P41273 AC105417.1-201ENST00000514691 285 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 RNU5F-4P-201ENST00000516581 114 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFSF9P41273 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.27□□□□□ -2.21
TNFSF9P41273 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.27□□□□□ -2.21
TNFSF9P41273 SNORA4-201ENST00000584302 138 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 AC068790.2-201ENST00000602601 557 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 AC136443.5-201ENST00000603741 370 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 AC083806.3-201ENST00000614016 455 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 uc_338.34-201ENST00000617467 174 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 SNORA43.4-201ENST00000629559 138 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 AC068205.3-201ENST00000636385 468 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
TNFSF9P41273 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TNFSF9P41273 MIR340-201ENST00000362125 95 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 U3.9-201ENST00000363823 204 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 RNU6-1090P-201ENST00000364065 94 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 Y_RNA.318-201ENST00000365131 97 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 SNORA32.2-201ENST00000384049 122 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 Y_RNA.436-201ENST00000384097 102 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 RNU6-517P-201ENST00000384362 110 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 SNORA12.2-201ENST00000391040 156 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 RNU2-7P-201ENST00000410794 178 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.26□□□□□ -2.21
TNFSF9P41273 HMGB1P29-201ENST00000505659 499 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.26□□□□□ -2.21
TNFSF9P41273 AP003034.1-201ENST00000534621 422 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.26□□□□□ -2.21
TNFSF9P41273 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.26□□□□□ -2.21
TNFSF9P41273 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.26□□□□□ -2.21
TNFSF9P41273 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.26□□□□□ -2.21
TNFSF9P41273 AC080013.6-201ENST00000606185 215 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 AC017083.3-201ENST00000609955 700 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 OR5AK4P-201ENST00000635912 903 ntBASIC1.26□□□□□ -2.21
TNFSF9P41273 Y_RNA.399-201ENST00000383955 105 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 RNU5A-6P-201ENST00000384136 116 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 Y_RNA.504-201ENST00000384481 104 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 MIR489-201ENST00000384923 84 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
TNFSF9P41273 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.25□□□□□ -2.21
TNFSF9P41273 SNAP23P1-201ENST00000433229 246 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 MTCO2P7-201ENST00000446518 666 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 TPTE2P5-203ENST00000458118 728 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 RNU7-167P-201ENST00000459160 62 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 SRRM1P2-201ENST00000464531 1192 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 LRRC34P2-201ENST00000514850 553 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 RNU6-1098P-201ENST00000516772 96 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.25□□□□□ -2.21
TNFSF9P41273 RNU6-323P-201ENST00000521915 107 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 AC104576.1-201ENST00000524225 88 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.25□□□□□ -2.21
TNFSF9P41273 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TNFSF9P41273 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.25□□□□□ -2.21
TNFSF9P41273 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.25□□□□□ -2.21
TNFSF9P41273 SNORA77B-201ENST00000578179 125 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 AC078795.3-201ENST00000602913 472 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 CTHRC1P1-201ENST00000605383 469 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 PRR13P7-201ENST00000605538 430 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 AP001330.5-201ENST00000607176 411 ntBASIC1.25□□□□□ -2.21
TNFSF9P41273 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.25□□□□□ -2.21
TNFSF9P41273 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TNFSF9P41273 AC124864.2-201ENST00000624736 186 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms