Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SCARNA17.1-201ENST00000516211 143 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 SNORA31.6-201ENST00000516241 130 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 SCARNA17.2-201ENST00000516334 143 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 Y_RNA.706-201ENST00000516933 99 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC144568.1-201ENST00000520139 137 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.87□□□□□ -1.95
COL15A1P39059 AC016256.1-201ENST00000547971 354 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC022432.1-201ENST00000595739 310 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC100812.1-201ENST00000607622 580 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 SCARNA17.4-201ENST00000614296 143 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC007485.1-201ENST00000616755 206 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 Z75746.1-201ENST00000440243 2080 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.87□□□□□ -1.95
COL15A1P39059 AP000560.1-201ENST00000624150 1937 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 Y_RNA.39-201ENST00000362620 98 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 RNU6-639P-201ENST00000384074 107 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 RNY1P14-201ENST00000384426 108 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 MIR221-201ENST00000385135 110 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC097463.2-201ENST00000421074 142 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AL358453.1-201ENST00000422522 250 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AL160004.2-201ENST00000432935 350 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.87□□□□□ -1.95
COL15A1P39059 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.87□□□□□ -1.95
COL15A1P39059 MTND4P19-201ENST00000446659 478 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 RNU7-87P-201ENST00000459343 62 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.87□□□□□ -1.95
COL15A1P39059 AIG1P1-201ENST00000503376 148 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC107222.1-201ENST00000510899 637 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.87□□□□□ -1.95
COL15A1P39059 AC109329.1-201ENST00000518744 317 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 MIR5701-3-201ENST00000578890 82 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 MIR5701-1-201ENST00000585138 82 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 MIR5701-2-201ENST00000615634 82 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 SCARNA4-201ENST00000629045 128 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 SNORA43.4-201ENST00000629559 138 ntBASIC2.87□□□□□ -1.95
COL15A1P39059 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.86□□□□□ -1.95
COL15A1P39059 RNU6-529P-201ENST00000363383 104 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RNU6-1285P-201ENST00000363480 105 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RNU1-115P-201ENST00000365329 160 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 AC117470.1-201ENST00000381974 330 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 Y_RNA.496-201ENST00000384444 101 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RNU1-57P-201ENST00000384491 166 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 MIR32-201ENST00000384965 70 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 SNORA12.2-201ENST00000391040 156 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RPL21P75-201ENST00000396599 483 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RPL21P28-201ENST00000401418 483 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.86□□□□□ -1.95
COL15A1P39059 Z82188.1-201ENST00000436709 154 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RNU7-169P-201ENST00000459456 61 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RPL21P39-201ENST00000463605 483 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 AC087477.1-201ENST00000465747 340 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 AC087190.1-201ENST00000484462 480 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 AC093591.1-201ENST00000491435 481 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RPL21P16-201ENST00000495531 483 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RNA5SP112-201ENST00000515937 99 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.86□□□□□ -1.95
COL15A1P39059 AC104581.2-201ENST00000572227 430 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 RPL23AP88-201ENST00000605759 454 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 AC137590.2-201ENST00000619709 240 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 AC010297.1-201ENST00000623948 149 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 SNORD98-201ENST00000636377 67 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 MIR7515-201ENST00000637837 67 ntBASIC2.86□□□□□ -1.95
COL15A1P39059 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
COL15A1P39059 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.85□□□□□ -1.95
COL15A1P39059 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL15A1P39059 RNU6-1159P-201ENST00000362933 107 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 Y_RNA.148-201ENST00000363557 117 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 SNORA36A-201ENST00000384221 132 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 MIR186-201ENST00000384988 86 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 AL023284.1-201ENST00000403956 276 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 CYCSP48-201ENST00000417124 323 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 AC092427.1-202ENST00000430569 476 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 HMGN2P23-201ENST00000456759 269 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 TOMM22P6-201ENST00000465035 409 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 RNU6-567P-201ENST00000516746 107 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 HSPE1P18-201ENST00000517602 280 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 AC079598.5-201ENST00000547460 117 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 MIR3136-201ENST00000583498 78 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 AL159153.1-201ENST00000619688 317 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 MTND4P1-201ENST00000457501 1466 ntBASIC2.85□□□□□ -1.95
COL15A1P39059 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
COL15A1P39059 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL15A1P39059 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL15A1P39059 RNU6-655P-201ENST00000362858 107 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 RNU6-1032P-201ENST00000384100 107 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 MIR606-201ENST00000384851 96 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 MIR7-2-201ENST00000384970 110 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 SNORA69.1-201ENST00000390904 137 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 MIR190B-201ENST00000401119 79 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.84□□□□□ -1.96
COL15A1P39059 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.84□□□□□ -1.96
COL15A1P39059 AF186996.7-201ENST00000492781 209 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 SNORA31.16-201ENST00000516773 139 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.84□□□□□ -1.96
COL15A1P39059 AC004486.1-201ENST00000546846 233 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 HSBP1P1-201ENST00000555205 166 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 MIR5571-201ENST00000577998 113 ntBASIC2.84□□□□□ -1.96
COL15A1P39059 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms