Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNU4-20P-201ENST00000365601 151 ntBASIC1.57□□□□□ -2.16
RFC4P35249 RNU6-26P-201ENST00000383985 107 ntBASIC1.57□□□□□ -2.16
RFC4P35249 RNU6-378P-201ENST00000384324 107 ntBASIC1.57□□□□□ -2.16
RFC4P35249 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
RFC4P35249 RN7SKP61-201ENST00000410642 295 ntBASIC1.57□□□□□ -2.16
RFC4P35249 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC4P35249 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC4P35249 RPL23AP95-201ENST00000426806 265 ntBASIC1.57□□□□□ -2.16
RFC4P35249 AL133396.1-201ENST00000432048 687 ntBASIC1.57□□□□□ -2.16
RFC4P35249 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.57□□□□□ -2.16
RFC4P35249 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC4P35249 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC4P35249 RNU6-261P-201ENST00000459506 102 ntBASIC1.57□□□□□ -2.16
RFC4P35249 SRRM1P2-201ENST00000464531 1192 ntBASIC1.57□□□□□ -2.16
RFC4P35249 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.57□□□□□ -2.16
RFC4P35249 RNU6-189P-201ENST00000516120 101 ntBASIC1.57□□□□□ -2.16
RFC4P35249 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.57□□□□□ -2.16
RFC4P35249 RNU6-323P-201ENST00000521915 107 ntBASIC1.57□□□□□ -2.16
RFC4P35249 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC4P35249 CENPUP1-201ENST00000526649 1202 ntBASIC1.57□□□□□ -2.16
RFC4P35249 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.57□□□□□ -2.16
RFC4P35249 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
RFC4P35249 MIR3923-201ENST00000579521 83 ntBASIC1.57□□□□□ -2.16
RFC4P35249 AC064836.2-201ENST00000609491 462 ntBASIC1.57□□□□□ -2.16
RFC4P35249 AC083806.3-201ENST00000614016 455 ntBASIC1.57□□□□□ -2.16
RFC4P35249 MIR6788-201ENST00000618842 66 ntBASIC1.57□□□□□ -2.16
RFC4P35249 PVT1_3.1-201ENST00000620853 95 ntBASIC1.57□□□□□ -2.16
RFC4P35249 OR5AK4P-201ENST00000635912 903 ntBASIC1.57□□□□□ -2.16
RFC4P35249 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
RFC4P35249 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
RFC4P35249 RNU4-56P-201ENST00000364700 142 ntBASIC1.56□□□□□ -2.16
RFC4P35249 RNU6-1080P-201ENST00000383982 107 ntBASIC1.56□□□□□ -2.16
RFC4P35249 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RFC4P35249 CALM2P3-201ENST00000400429 449 ntBASIC1.56□□□□□ -2.16
RFC4P35249 MTCYBP2-201ENST00000407745 171 ntBASIC1.56□□□□□ -2.16
RFC4P35249 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RFC4P35249 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.56□□□□□ -2.16
RFC4P35249 AL357134.1-201ENST00000445848 426 ntBASIC1.56□□□□□ -2.16
RFC4P35249 RPS29P29-201ENST00000456396 171 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AC083798.1-201ENST00000472671 131 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AC016632.1-201ENST00000503994 196 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AC104576.1-201ENST00000524225 88 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AP005597.4-201ENST00000526762 229 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AP003034.1-201ENST00000534621 422 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AC025423.5-201ENST00000550230 219 ntBASIC1.56□□□□□ -2.16
RFC4P35249 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
RFC4P35249 MIR151B-201ENST00000584249 96 ntBASIC1.56□□□□□ -2.16
RFC4P35249 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.56□□□□□ -2.16
RFC4P35249 AC010900.2-201ENST00000604508 210 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
RFC4P35249 AL590240.4-201ENST00000616908 390 ntBASIC1.56□□□□□ -2.16
RFC4P35249 SNORA43.4-201ENST00000629559 138 ntBASIC1.56□□□□□ -2.16
RFC4P35249 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RFC4P35249 MIR6767-201ENST00000637302 66 ntBASIC1.56□□□□□ -2.16
RFC4P35249 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.55□□□□□ -2.16
RFC4P35249 RNU6-1322P-201ENST00000364309 107 ntBASIC1.55□□□□□ -2.16
RFC4P35249 RNU6-160P-201ENST00000384591 107 ntBASIC1.55□□□□□ -2.16
RFC4P35249 AL357139.1-201ENST00000407792 426 ntBASIC1.55□□□□□ -2.16
RFC4P35249 MIR548J-201ENST00000408833 112 ntBASIC1.55□□□□□ -2.16
RFC4P35249 RNA5SP201-201ENST00000410316 124 ntBASIC1.55□□□□□ -2.16
RFC4P35249 RNU2-41P-201ENST00000410991 178 ntBASIC1.55□□□□□ -2.16
RFC4P35249 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC4P35249 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC4P35249 MTCO2P3-201ENST00000442543 421 ntBASIC1.55□□□□□ -2.16
RFC4P35249 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.55□□□□□ -2.16
RFC4P35249 AL035666.1-201ENST00000446195 348 ntBASIC1.55□□□□□ -2.16
RFC4P35249 MTND1P29-201ENST00000448112 647 ntBASIC1.55□□□□□ -2.16
RFC4P35249 MTND3P16-201ENST00000452205 344 ntBASIC1.55□□□□□ -2.16
RFC4P35249 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC4P35249 AC008628.2-201ENST00000502605 298 ntBASIC1.55□□□□□ -2.16
RFC4P35249 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.55□□□□□ -2.16
RFC4P35249 Z98751.3-201ENST00000604447 521 ntBASIC1.55□□□□□ -2.16
RFC4P35249 AL356157.2-201ENST00000605122 111 ntBASIC1.55□□□□□ -2.16
RFC4P35249 AL357078.3-201ENST00000607528 618 ntBASIC1.55□□□□□ -2.16
RFC4P35249 PCGEM1.1-201ENST00000613431 131 ntBASIC1.55□□□□□ -2.16
RFC4P35249 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.55□□□□□ -2.16
RFC4P35249 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC4P35249 AC124864.2-201ENST00000624736 186 ntBASIC1.55□□□□□ -2.16
RFC4P35249 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.55□□□□□ -2.16
RFC4P35249 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
RFC4P35249 AC092268.1-201ENST00000342691 405 ntBASIC1.54□□□□□ -2.16
RFC4P35249 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RFC4P35249 RNU6-1085P-201ENST00000363576 107 ntBASIC1.54□□□□□ -2.16
RFC4P35249 U3.9-201ENST00000363823 204 ntBASIC1.54□□□□□ -2.16
RFC4P35249 RNA5SP493-201ENST00000364115 91 ntBASIC1.54□□□□□ -2.16
RFC4P35249 MIR222-201ENST00000384992 110 ntBASIC1.54□□□□□ -2.16
RFC4P35249 RNU6-780P-201ENST00000391030 104 ntBASIC1.54□□□□□ -2.16
RFC4P35249 MTCO3P40-201ENST00000392516 676 ntBASIC1.54□□□□□ -2.16
RFC4P35249 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.54□□□□□ -2.16
RFC4P35249 MTND3P9-201ENST00000429526 346 ntBASIC1.54□□□□□ -2.16
RFC4P35249 SNRPEP8-201ENST00000442866 260 ntBASIC1.54□□□□□ -2.16
RFC4P35249 snoU13.9-201ENST00000458927 103 ntBASIC1.54□□□□□ -2.16
RFC4P35249 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.54□□□□□ -2.16
RFC4P35249 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.54□□□□□ -2.16
RFC4P35249 AC025465.3-201ENST00000510570 311 ntBASIC1.54□□□□□ -2.16
RFC4P35249 RNVU1-2-201ENST00000516326 135 ntBASIC1.54□□□□□ -2.16
RFC4P35249 RNU6-1069P-201ENST00000516612 133 ntBASIC1.54□□□□□ -2.16
RFC4P35249 RNU6-612P-201ENST00000516909 102 ntBASIC1.54□□□□□ -2.16
RFC4P35249 RNU6-835P-201ENST00000516974 104 ntBASIC1.54□□□□□ -2.16
RFC4P35249 MIR5692C1-201ENST00000585309 91 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms