Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC007375.1-201ENST00000554513 578 ntBASIC2.69□□□□□ -1.98
CIITAP33076 AC023824.2-201ENST00000566185 400 ntBASIC2.69□□□□□ -1.98
CIITAP33076 AC113195.1-201ENST00000579952 141 ntBASIC2.69□□□□□ -1.98
CIITAP33076 MIR3199-1-201ENST00000582434 88 ntBASIC2.69□□□□□ -1.98
CIITAP33076 MIR5007-201ENST00000583098 95 ntBASIC2.69□□□□□ -1.98
CIITAP33076 AL356575.1-201ENST00000603008 283 ntBASIC2.69□□□□□ -1.98
CIITAP33076 AL078596.1-201ENST00000624856 447 ntBASIC2.69□□□□□ -1.98
CIITAP33076 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.69□□□□□ -1.98
CIITAP33076 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CIITAP33076 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CIITAP33076 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
CIITAP33076 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.68□□□□□ -1.98
CIITAP33076 MIR21-201ENST00000362134 72 ntBASIC2.68□□□□□ -1.98
CIITAP33076 Y_RNA.39-201ENST00000362620 98 ntBASIC2.68□□□□□ -1.98
CIITAP33076 RNU4-9P-201ENST00000364951 139 ntBASIC2.68□□□□□ -1.98
CIITAP33076 RNU6-17P-201ENST00000384245 107 ntBASIC2.68□□□□□ -1.98
CIITAP33076 Y_RNA.504-201ENST00000384481 104 ntBASIC2.68□□□□□ -1.98
CIITAP33076 RNU6-18P-201ENST00000384527 107 ntBASIC2.68□□□□□ -1.98
CIITAP33076 MIR625-201ENST00000385047 85 ntBASIC2.68□□□□□ -1.98
CIITAP33076 RNU6-823P-201ENST00000391042 103 ntBASIC2.68□□□□□ -1.98
CIITAP33076 MTCYBP2-201ENST00000407745 171 ntBASIC2.68□□□□□ -1.98
CIITAP33076 CYCSP48-201ENST00000417124 323 ntBASIC2.68□□□□□ -1.98
CIITAP33076 AIMP1P2-201ENST00000425294 312 ntBASIC2.68□□□□□ -1.98
CIITAP33076 AC244670.1-201ENST00000436879 112 ntBASIC2.68□□□□□ -1.98
CIITAP33076 U8.20-201ENST00000459445 131 ntBASIC2.68□□□□□ -1.98
CIITAP33076 AC087477.1-201ENST00000465747 340 ntBASIC2.68□□□□□ -1.98
CIITAP33076 RNA5SP24-201ENST00000516478 95 ntBASIC2.68□□□□□ -1.98
CIITAP33076 SNORA31.16-201ENST00000516773 139 ntBASIC2.68□□□□□ -1.98
CIITAP33076 RNU7-4P-201ENST00000516961 62 ntBASIC2.68□□□□□ -1.98
CIITAP33076 AC021269.2-201ENST00000532318 330 ntBASIC2.68□□□□□ -1.98
CIITAP33076 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.68□□□□□ -1.98
CIITAP33076 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.68□□□□□ -1.98
CIITAP33076 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.68□□□□□ -1.98
CIITAP33076 AP000560.1-201ENST00000624150 1937 ntBASIC2.68□□□□□ -1.98
CIITAP33076 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CIITAP33076 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.67□□□□□ -1.98
CIITAP33076 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CIITAP33076 RNU6-1010P-201ENST00000362757 107 ntBASIC2.67□□□□□ -1.98
CIITAP33076 Y_RNA.106-201ENST00000363189 100 ntBASIC2.67□□□□□ -1.98
CIITAP33076 SNORA38-201ENST00000363946 132 ntBASIC2.67□□□□□ -1.98
CIITAP33076 RNU6-450P-201ENST00000364654 107 ntBASIC2.67□□□□□ -1.98
CIITAP33076 RNA5SP126-201ENST00000365092 109 ntBASIC2.67□□□□□ -1.98
CIITAP33076 DEFA7P-201ENST00000382676 285 ntBASIC2.67□□□□□ -1.98
CIITAP33076 RNU6-708P-201ENST00000384217 107 ntBASIC2.67□□□□□ -1.98
CIITAP33076 Y_RNA.459-201ENST00000384251 102 ntBASIC2.67□□□□□ -1.98
CIITAP33076 MIR568-201ENST00000385036 95 ntBASIC2.67□□□□□ -1.98
CIITAP33076 RNA5SP213-201ENST00000391031 106 ntBASIC2.67□□□□□ -1.98
CIITAP33076 Y_RNA.592-201ENST00000410274 109 ntBASIC2.67□□□□□ -1.98
CIITAP33076 AC007098.1-201ENST00000420122 367 ntBASIC2.67□□□□□ -1.98
CIITAP33076 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CIITAP33076 SUMO1P4-201ENST00000429430 302 ntBASIC2.67□□□□□ -1.98
CIITAP33076 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.67□□□□□ -1.98
CIITAP33076 AL353705.4-201ENST00000449661 238 ntBASIC2.67□□□□□ -1.98
CIITAP33076 OR2AQ1P-201ENST00000451972 200 ntBASIC2.67□□□□□ -1.98
CIITAP33076 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.67□□□□□ -1.98
CIITAP33076 snoU13.14-201ENST00000459372 104 ntBASIC2.67□□□□□ -1.98
CIITAP33076 TOMM22P6-201ENST00000465035 409 ntBASIC2.67□□□□□ -1.98
CIITAP33076 RNU7-175P-201ENST00000515915 61 ntBASIC2.67□□□□□ -1.98
CIITAP33076 SNORA40.14-201ENST00000516543 86 ntBASIC2.67□□□□□ -1.98
CIITAP33076 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.67□□□□□ -1.98
CIITAP33076 AC105245.1-201ENST00000581934 244 ntBASIC2.67□□□□□ -1.98
CIITAP33076 SNORD115-32-201ENST00000364079 82 ntBASIC2.66□□□□□ -1.98
CIITAP33076 RNU6-26P-201ENST00000383985 107 ntBASIC2.66□□□□□ -1.98
CIITAP33076 Y_RNA.455-201ENST00000384230 98 ntBASIC2.66□□□□□ -1.98
CIITAP33076 MIR32-201ENST00000384965 70 ntBASIC2.66□□□□□ -1.98
CIITAP33076 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CIITAP33076 SNORA69.1-201ENST00000390904 137 ntBASIC2.66□□□□□ -1.98
CIITAP33076 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CIITAP33076 RNU6-1328P-201ENST00000410938 106 ntBASIC2.66□□□□□ -1.98
CIITAP33076 Z98742.2-201ENST00000431564 187 ntBASIC2.66□□□□□ -1.98
CIITAP33076 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.66□□□□□ -1.98
CIITAP33076 AC018634.1-201ENST00000437554 401 ntBASIC2.66□□□□□ -1.98
CIITAP33076 GPM6BP3-201ENST00000442797 145 ntBASIC2.66□□□□□ -1.98
CIITAP33076 MTATP8P1-201ENST00000467115 207 ntBASIC2.66□□□□□ -1.98
CIITAP33076 RPL36AP48-201ENST00000485521 314 ntBASIC2.66□□□□□ -1.98
CIITAP33076 AC016632.1-201ENST00000503994 196 ntBASIC2.66□□□□□ -1.98
CIITAP33076 RNU5F-2P-201ENST00000516066 82 ntBASIC2.66□□□□□ -1.98
CIITAP33076 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.66□□□□□ -1.98
CIITAP33076 AC079598.5-201ENST00000547460 117 ntBASIC2.66□□□□□ -1.98
CIITAP33076 AL117187.1-201ENST00000555482 181 ntBASIC2.66□□□□□ -1.98
CIITAP33076 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.66□□□□□ -1.98
CIITAP33076 AC006600.1-201ENST00000572529 153 ntBASIC2.66□□□□□ -1.98
CIITAP33076 AL132822.1-201ENST00000617063 513 ntBASIC2.66□□□□□ -1.98
CIITAP33076 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
CIITAP33076 U2.1-201ENST00000618978 145 ntBASIC2.66□□□□□ -1.98
CIITAP33076 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.66□□□□□ -1.98
CIITAP33076 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CIITAP33076 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.98
CIITAP33076 AC002543.1-201ENST00000299783 1954 ntBASIC2.65□□□□□ -1.98
CIITAP33076 AC092268.1-201ENST00000342691 405 ntBASIC2.65□□□□□ -1.99
CIITAP33076 MIR6073-201ENST00000352083 89 ntBASIC2.65□□□□□ -1.99
CIITAP33076 Y_RNA.358-201ENST00000365491 99 ntBASIC2.65□□□□□ -1.99
CIITAP33076 Y_RNA.557-201ENST00000384680 107 ntBASIC2.65□□□□□ -1.99
CIITAP33076 RNU4-53P-201ENST00000410828 140 ntBASIC2.65□□□□□ -1.99
CIITAP33076 AC097463.2-201ENST00000421074 142 ntBASIC2.65□□□□□ -1.99
CIITAP33076 MTND3P2-201ENST00000438452 342 ntBASIC2.65□□□□□ -1.99
CIITAP33076 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.65□□□□□ -1.99
CIITAP33076 snoU13.6-201ENST00000458785 104 ntBASIC2.65□□□□□ -1.99
CIITAP33076 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.65□□□□□ -1.99
CIITAP33076 AC144568.1-201ENST00000520139 137 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms