Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU2-8P-201ENST00000410727 190 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AC016909.1-201ENST00000415916 166 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.44□□□□□ -2.34
CASQ1P31415 Z82205.1-201ENST00000428456 297 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 NFU1P2-201ENST00000448700 469 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 snoU13.25-201ENST00000458945 104 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.44□□□□□ -2.34
CASQ1P31415 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.44□□□□□ -2.34
CASQ1P31415 AC090049.2-201ENST00000550377 109 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.44□□□□□ -2.34
CASQ1P31415 Z99497.2-201ENST00000603634 310 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AC091805.2-201ENST00000603848 235 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AC016727.1-205ENST00000605437 569 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.44□□□□□ -2.34
CASQ1P31415 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
CASQ1P31415 AC107308.1-201ENST00000615897 301 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 AC073349.3-201ENST00000617616 186 ntBASIC0.44□□□□□ -2.34
CASQ1P31415 RNU6-715P-201ENST00000365204 103 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CASQ1P31415 SNORD116-13-201ENST00000384408 92 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 MIR549A-201ENST00000385268 96 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 Y_RNA.608-201ENST00000410647 95 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.43□□□□□ -2.34
CASQ1P31415 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.43□□□□□ -2.34
CASQ1P31415 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.43□□□□□ -2.34
CASQ1P31415 AC103996.1-201ENST00000555468 102 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 AC025627.3-201ENST00000582078 182 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 MIR4781-201ENST00000585250 76 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.43□□□□□ -2.34
CASQ1P31415 AC018714.1-201ENST00000605028 208 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 snoU13.31-201ENST00000607291 104 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 AL031667.3-201ENST00000620124 655 ntBASIC0.43□□□□□ -2.34
CASQ1P31415 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.43□□□□□ -2.34
CASQ1P31415 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.43□□□□□ -2.34
CASQ1P31415 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.43□□□□□ -2.34
CASQ1P31415 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
CASQ1P31415 RNU6-199P-201ENST00000362954 107 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 SNORA16.2-201ENST00000390991 127 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 RNU6-550P-201ENST00000391057 101 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.42□□□□□ -2.34
CASQ1P31415 AC005002.2-201ENST00000438228 269 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AC233266.1-201ENST00000454518 96 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AC091951.3-201ENST00000504093 246 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AF131216.2-201ENST00000512316 564 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 RNU6-467P-201ENST00000517027 110 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 RNU4-5P-201ENST00000607255 135 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AC242852.1-201ENST00000612151 96 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AC005562.2-201ENST00000618264 111 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AC244015.1-201ENST00000622301 99 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 AC011155.2-201ENST00000623202 216 ntBASIC0.42□□□□□ -2.34
CASQ1P31415 RNU5F-6P-201ENST00000362979 116 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 RNU6-169P-201ENST00000365336 107 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 RNU6-1200P-201ENST00000384162 107 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 RNU6-440P-201ENST00000390882 105 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 SNORA75.2-201ENST00000391138 150 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 SNORA75.3-201ENST00000391231 150 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AC245047.3-201ENST00000429428 127 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.41□□□□□ -2.34
CASQ1P31415 AC022364.2-201ENST00000457963 554 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AL049830.1-201ENST00000468034 425 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AC116562.3-201ENST00000506136 177 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AK3P2-201ENST00000507976 429 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 RNU4-57P-201ENST00000515980 135 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.41□□□□□ -2.34
CASQ1P31415 AC068587.5-201ENST00000528506 175 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AP000889.1-201ENST00000530968 660 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.41□□□□□ -2.34
CASQ1P31415 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.41□□□□□ -2.34
CASQ1P31415 AL162424.1-201ENST00000602325 221 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AL157392.4-201ENST00000609756 345 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AC138749.5-201ENST00000611461 208 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 AL359075.3-201ENST00000613288 217 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 MIR6516-201ENST00000630554 81 ntBASIC0.41□□□□□ -2.34
CASQ1P31415 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.41□□□□□ -2.34
CASQ1P31415 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
CASQ1P31415 RNU6-636P-201ENST00000384598 107 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 AL355796.1-201ENST00000406706 323 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.4□□□□□ -2.35
CASQ1P31415 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.4□□□□□ -2.35
CASQ1P31415 snoU13.6-201ENST00000458785 104 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 SNORA70.12-201ENST00000516084 153 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 RNA5SP458-201ENST00000516188 119 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 RNU7-128P-201ENST00000517247 62 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 AC026470.2-201ENST00000561492 181 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 AC109446.2-201ENST00000567872 497 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 MIR4524B-201ENST00000581569 115 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 AP001836.1-201ENST00000604675 523 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 AL359821.1-201ENST00000605519 182 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 AC138649.3-201ENST00000622154 254 ntBASIC0.4□□□□□ -2.35
CASQ1P31415 Y_RNA.18-201ENST00000362461 102 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 RNU6-827P-201ENST00000365553 106 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 RNU6-163P-201ENST00000384396 106 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 SNORA40.4-201ENST00000390971 128 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 MRPL42P3-201ENST00000401492 326 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 AP000275.1-201ENST00000411943 390 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.39□□□□□ -2.35
CASQ1P31415 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.39□□□□□ -2.35
CASQ1P31415 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms