Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RNU6-377P-201ENST00000515965 102 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC022616.6-201ENST00000520479 119 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC016256.1-201ENST00000547971 354 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.33□□□□□ -2.36
HOXA6P31267 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.33□□□□□ -2.36
HOXA6P31267 MIR4742-201ENST00000581069 85 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC025627.3-201ENST00000582078 182 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
HOXA6P31267 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.33□□□□□ -2.36
HOXA6P31267 AP001596.2-201ENST00000608410 312 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.33□□□□□ -2.36
HOXA6P31267 AC106754.2-201ENST00000623006 233 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AL157786.1-207ENST00000627771 695 ntBASIC0.33□□□□□ -2.36
HOXA6P31267 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.33□□□□□ -2.36
HOXA6P31267 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
HOXA6P31267 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HOXA6P31267 U3.4-201ENST00000363352 213 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 SNORD18A-201ENST00000363753 72 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNU6-692P-201ENST00000384496 107 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNU2-3P-201ENST00000410144 191 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNU6-607P-201ENST00000411283 108 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 AC010154.1-201ENST00000425857 269 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 AC137499.1-201ENST00000427602 88 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.32□□□□□ -2.36
HOXA6P31267 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.32□□□□□ -2.36
HOXA6P31267 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.32□□□□□ -2.36
HOXA6P31267 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.32□□□□□ -2.36
HOXA6P31267 AC113410.1-201ENST00000505029 247 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 MTND3P25-201ENST00000509243 135 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNU6-947P-201ENST00000516264 106 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNA5SP337-201ENST00000517007 109 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.32□□□□□ -2.36
HOXA6P31267 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.32□□□□□ -2.36
HOXA6P31267 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.32□□□□□ -2.36
HOXA6P31267 TPRKBP2-201ENST00000565969 475 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 TMF1P1-201ENST00000576058 373 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.32□□□□□ -2.36
HOXA6P31267 AC008521.1-201ENST00000587471 187 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 AC080078.2-201ENST00000603766 501 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 AC097478.2-201ENST00000610572 514 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 AC021506.2-201ENST00000612354 169 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 MTND4P12-201ENST00000498999 1377 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 BX322639.1-202ENST00000423987 2213 ntBASIC0.32□□□□□ -2.36
HOXA6P31267 RNU4-67P-201ENST00000364569 141 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 RNU6-969P-201ENST00000383900 105 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 Y_RNA.412-201ENST00000384001 104 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 SNORA36A-201ENST00000384221 132 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 RNA5SP323-201ENST00000391094 133 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 AC007283.2-201ENST00000424739 197 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 RPL23AP95-201ENST00000426806 265 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.31□□□□□ -2.36
HOXA6P31267 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.31□□□□□ -2.36
HOXA6P31267 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.31□□□□□ -2.36
HOXA6P31267 RNU6-567P-201ENST00000516746 107 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 AC109479.2-201ENST00000517842 174 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HOXA6P31267 AL357312.1-201ENST00000603879 298 ntBASIC0.31□□□□□ -2.36
HOXA6P31267 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
HOXA6P31267 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.31□□□□□ -2.36
HOXA6P31267 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
HOXA6P31267 SNORD32A-201ENST00000364805 84 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 RNU6-378P-201ENST00000384324 107 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 SNORA24.1-201ENST00000384401 135 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 SNORA12.1-201ENST00000390873 148 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 SNORA16.2-201ENST00000390991 127 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 RNA5SP109-201ENST00000391010 116 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 MIR300-201ENST00000401138 83 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.3□□□□□ -2.36
HOXA6P31267 TIMM9P3-201ENST00000428659 274 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AL133396.1-201ENST00000432048 687 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 USP9YP28-201ENST00000435142 589 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 RPL22P17-201ENST00000438729 315 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 MTND3P1-201ENST00000441336 220 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 NFU1P2-201ENST00000448700 469 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC233266.1-201ENST00000454518 96 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 C1DP4-201ENST00000455429 424 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.3□□□□□ -2.36
HOXA6P31267 AC016550.1-201ENST00000505348 785 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC022493.2-201ENST00000506122 481 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 RBBP4P6-201ENST00000508098 202 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC117522.1-201ENST00000509821 380 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC091874.1-201ENST00000511402 339 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 DEFB131C-201ENST00000528817 165 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.3□□□□□ -2.36
HOXA6P31267 AC073539.2-201ENST00000597113 165 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC078795.3-201ENST00000602913 472 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AL929325.1-201ENST00000603096 117 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC064872.1-201ENST00000604823 1072 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC242852.1-201ENST00000612151 96 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC005520.5-201ENST00000613926 164 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC009509.4-201ENST00000619202 509 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC244015.1-201ENST00000622301 99 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AL359697.1-201ENST00000624879 587 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
HOXA6P31267 snoU2-30.2-201ENST00000362805 70 ntBASIC0.29□□□□□ -2.36
HOXA6P31267 RNU6-1303P-201ENST00000364841 107 ntBASIC0.29□□□□□ -2.36
HOXA6P31267 RNU6-418P-201ENST00000384035 107 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms