Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC105185.1-201ENST00000518705 535 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 AC007751.1-201ENST00000529260 376 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.54□□□□□ -2.5
CLIP1P30622 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.54□□□□□ -2.5
CLIP1P30622 MIR4637-201ENST00000582405 84 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 MIR3192-201ENST00000584920 77 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.54□□□□□ -2.5
CLIP1P30622 BCRP9-201ENST00000605312 388 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 AC004832.4-201ENST00000608952 331 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.54□□□□□ -2.5
CLIP1P30622 RNU6-97P-201ENST00000363387 104 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 RNU6-343P-201ENST00000364709 104 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 SNORD114-12-201ENST00000365400 75 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AL079342.2-201ENST00000403367 482 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.55□□□□□ -2.5
CLIP1P30622 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.55□□□□□ -2.5
CLIP1P30622 AC096531.1-201ENST00000419107 107 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.55□□□□□ -2.5
CLIP1P30622 AL590632.1-201ENST00000424289 371 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.55□□□□□ -2.5
CLIP1P30622 MTND1P9-201ENST00000453775 944 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AC016925.1-201ENST00000458303 298 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 LINC01399-202ENST00000458450 244 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 snoU13.21-201ENST00000459368 105 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AC074198.2-201ENST00000508153 258 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 RNU6-856P-201ENST00000516959 98 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.55□□□□□ -2.5
CLIP1P30622 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.55□□□□□ -2.5
CLIP1P30622 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.55□□□□□ -2.5
CLIP1P30622 AC091135.1-201ENST00000585943 307 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 BNIP3P9-201ENST00000603714 553 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.55□□□□□ -2.5
CLIP1P30622 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.55□□□□□ -2.5
CLIP1P30622 RNU6-932P-201ENST00000391108 106 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 MTCO2P31-201ENST00000402702 684 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.55□□□□□ -2.5
CLIP1P30622 AP000484.1-201ENST00000620067 1252 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 SCARNA4-202ENST00000625402 129 ntBASIC-0.55□□□□□ -2.5
CLIP1P30622 MIR1-1-201ENST00000362147 71 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 SNORD31B-201ENST00000364977 69 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 RNU6-40P-201ENST00000384254 107 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.56□□□□□ -2.5
CLIP1P30622 BTF3P11-201ENST00000426582 477 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.56□□□□□ -2.5
CLIP1P30622 RPL18AP17-201ENST00000455326 198 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 RNU7-14P-201ENST00000459331 62 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 RNA5SP94-201ENST00000516917 108 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.56□□□□□ -2.5
CLIP1P30622 AK6P2-201ENST00000549020 471 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 AL606834.3-201ENST00000602615 496 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 AC133794.1-201ENST00000602731 914 ntBASIC-0.56□□□□□ -2.5
CLIP1P30622 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.56□□□□□ -2.5
CLIP1P30622 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.56□□□□□ -2.5
CLIP1P30622 SNORD56.1-201ENST00000362913 68 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 SNORA8.2-201ENST00000384372 139 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 MIR217-201ENST00000384817 110 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 AL359634.1-202ENST00000404721 284 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 MIR1185-1-201ENST00000408598 86 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.57□□□□□ -2.5
CLIP1P30622 AC092427.1-201ENST00000439177 601 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.57□□□□□ -2.5
CLIP1P30622 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 AL163973.1-201ENST00000484753 577 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.57□□□□□ -2.5
CLIP1P30622 AC109446.1-201ENST00000566172 220 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 AL136363.2-201ENST00000604173 851 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 AL592221.1-201ENST00000605266 382 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 AC018889.1-201ENST00000605372 397 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.57□□□□□ -2.5
CLIP1P30622 MIR8054-201ENST00000620877 86 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 MIR1322-201ENST00000638013 71 ntBASIC-0.57□□□□□ -2.5
CLIP1P30622 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.57□□□□□ -2.5
CLIP1P30622 SNORA2.2-201ENST00000365473 135 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 MIR7-1-201ENST00000384871 110 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 MIR520G-201ENST00000385064 90 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 MIR520H-201ENST00000385126 88 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 SNORD111-201ENST00000408139 94 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 MIR1468-201ENST00000410600 86 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.58□□□□□ -2.5
CLIP1P30622 RPL39P36-201ENST00000490784 156 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 AC114811.1-201ENST00000507207 168 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.58□□□□□ -2.5
CLIP1P30622 MIR548AO-201ENST00000579992 96 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 AL670379.3-201ENST00000605040 251 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 MIR6755-201ENST00000619993 66 ntBASIC-0.58□□□□□ -2.5
CLIP1P30622 SNORA18.1-201ENST00000363418 128 ntBASIC-0.59□□□□□ -2.5
CLIP1P30622 RNU6-819P-201ENST00000364116 107 ntBASIC-0.59□□□□□ -2.5
CLIP1P30622 RNU6-72P-201ENST00000384285 79 ntBASIC-0.59□□□□□ -2.5
CLIP1P30622 RNU4-46P-201ENST00000410818 138 ntBASIC-0.59□□□□□ -2.5
CLIP1P30622 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.59□□□□□ -2.5
CLIP1P30622 MRPS10P2-201ENST00000431226 381 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms