Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC064807.4-201ENST00000607201 407 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AC018645.2-201ENST00000609151 472 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 MIR6718-201ENST00000616153 80 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL136221.1-201ENST00000621449 509 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL157786.1-207ENST00000627771 695 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL445984.1-201ENST00000637834 659 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 RNU6-562P-201ENST00000362731 107 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 RNU6-179P-201ENST00000363350 107 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 RNU6-931P-201ENST00000363850 107 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
COL4A5P29400 MIR300-201ENST00000401138 83 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A5P29400 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A5P29400 AL133396.1-201ENST00000432048 687 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.5□□□□□ -2.33
COL4A5P29400 AC016925.1-201ENST00000458303 298 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AL133373.1-201ENST00000497098 94 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AC011406.1-201ENST00000512440 370 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AC023050.3-201ENST00000541142 333 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 ZNF321P-202ENST00000550843 495 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A5P29400 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A5P29400 MIR3941-201ENST00000582572 103 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AC110760.3-201ENST00000598794 467 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AC107304.1-201ENST00000604229 296 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AC104458.1-201ENST00000608243 463 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 AL021879.1-201ENST00000611756 288 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 MTND5P17-201ENST00000418405 1603 ntBASIC0.5□□□□□ -2.33
COL4A5P29400 RNU6-545P-201ENST00000362681 104 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 Y_RNA.97-201ENST00000363094 102 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 SNORD114-24-201ENST00000365029 72 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNA5SP259-201ENST00000365541 109 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNU6-692P-201ENST00000384496 107 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 Y_RNA.576-201ENST00000384781 102 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 MIR19B1-201ENST00000384829 87 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 CDK8P2-201ENST00000415020 547 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC060773.1-201ENST00000421698 310 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 MED13P1-201ENST00000428342 171 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC084290.1-201ENST00000434995 374 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AL512286.1-201ENST00000439244 400 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AL049829.1-201ENST00000465411 156 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC008628.2-201ENST00000502605 298 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 HSPE1P23-201ENST00000509838 286 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 ACA64.5-201ENST00000516207 127 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.49□□□□□ -2.33
COL4A5P29400 AC005520.5-201ENST00000613926 164 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNU6-428P-201ENST00000362942 107 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNU6-157P-201ENST00000383957 107 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 SNORA32.2-201ENST00000384049 122 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNU6-636P-201ENST00000384598 107 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 MIR200A-201ENST00000384875 90 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RPS29P13-201ENST00000402041 169 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 EEF1A1P40-201ENST00000412883 573 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.49□□□□□ -2.33
COL4A5P29400 AC010099.3-201ENST00000423896 409 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC007283.2-201ENST00000424739 197 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.49□□□□□ -2.33
COL4A5P29400 AL356583.2-201ENST00000426536 280 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 DYNLT3P2-201ENST00000442517 295 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC013470.1-201ENST00000453438 462 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC091435.1-201ENST00000505442 584 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNU4-57P-201ENST00000515980 135 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNU1-142P-201ENST00000516682 145 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 RNA5SP437-201ENST00000517249 129 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 CENPUP1-201ENST00000526649 1202 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC016256.1-201ENST00000547971 354 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.49□□□□□ -2.33
COL4A5P29400 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.49□□□□□ -2.33
COL4A5P29400 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AC104073.3-201ENST00000610942 955 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AL607023.1-201ENST00000620045 248 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.49□□□□□ -2.33
COL4A5P29400 AC131159.1-201ENST00000621854 213 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 uc_338.22-201ENST00000622722 187 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 AL359697.1-201ENST00000624879 587 ntBASIC0.49□□□□□ -2.33
COL4A5P29400 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.49□□□□□ -2.33
COL4A5P29400 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
COL4A5P29400 RNU6-1123P-201ENST00000362347 106 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 RNU4-1-201ENST00000363925 141 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 RNU6-809P-201ENST00000384461 107 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 PIGFP2-201ENST00000421400 651 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 SNORD124-201ENST00000459577 104 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AC116562.3-201ENST00000506136 177 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.48□□□□□ -2.33
COL4A5P29400 RNU6-322P-201ENST00000516010 103 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 RNU4-77P-201ENST00000516692 156 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AC068587.5-201ENST00000528506 175 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.48□□□□□ -2.33
COL4A5P29400 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
COL4A5P29400 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.48□□□□□ -2.33
COL4A5P29400 AL513534.2-201ENST00000603836 250 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.48□□□□□ -2.33
COL4A5P29400 AC012557.2-201ENST00000605919 418 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AC004492.1-201ENST00000607036 742 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 RNU4-5P-201ENST00000607255 135 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AL157392.4-201ENST00000609756 345 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AL133173.2-201ENST00000614270 90 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms