Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RN7SKP210-201ENST00000459176 261 ntBASIC3.03□□□□□ -1.92
CTGFP29279 RNU6-581P-201ENST00000516214 105 ntBASIC3.03□□□□□ -1.92
CTGFP29279 IGKV3-31-201ENST00000523109 329 ntBASIC3.03□□□□□ -1.92
CTGFP29279 AL590705.4-201ENST00000532209 134 ntBASIC3.03□□□□□ -1.92
CTGFP29279 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.03□□□□□ -1.92
CTGFP29279 ZNF861P-201ENST00000588126 639 ntBASIC3.03□□□□□ -1.92
CTGFP29279 BX284668.6-201ENST00000606899 438 ntBASIC3.03□□□□□ -1.92
CTGFP29279 RMST_8.1-201ENST00000610287 165 ntBASIC3.03□□□□□ -1.92
CTGFP29279 AL136164.4-201ENST00000625013 2135 ntBASIC3.03□□□□□ -1.92
CTGFP29279 MIR3199-2-201ENST00000636243 86 ntBASIC3.03□□□□□ -1.92
CTGFP29279 MAPK10-362ENST00000641864 4484 ntBASIC3.03□□□□□ -1.92
CTGFP29279 AC009541.1-201ENST00000438279 2662 ntBASIC3.03□□□□□ -1.92
CTGFP29279 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
CTGFP29279 AC010680.1-201ENST00000590024 3590 ntBASIC3.02□□□□□ -1.93
CTGFP29279 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.02□□□□□ -1.93
CTGFP29279 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTGFP29279 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
CTGFP29279 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.02□□□□□ -1.93
CTGFP29279 RNA5SP295-201ENST00000362655 121 ntBASIC3.02□□□□□ -1.93
CTGFP29279 SNORD56.1-201ENST00000362913 68 ntBASIC3.02□□□□□ -1.93
CTGFP29279 Y_RNA.143-201ENST00000363520 106 ntBASIC3.02□□□□□ -1.93
CTGFP29279 RNU6-215P-201ENST00000365169 102 ntBASIC3.02□□□□□ -1.93
CTGFP29279 RNU6-198P-201ENST00000384258 104 ntBASIC3.02□□□□□ -1.93
CTGFP29279 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CTGFP29279 SNORD115-46-201ENST00000390982 71 ntBASIC3.02□□□□□ -1.93
CTGFP29279 MTCYBP2-201ENST00000407745 171 ntBASIC3.02□□□□□ -1.93
CTGFP29279 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.02□□□□□ -1.93
CTGFP29279 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.02□□□□□ -1.93
CTGFP29279 RNU6-394P-201ENST00000410735 107 ntBASIC3.02□□□□□ -1.93
CTGFP29279 AC074117.2-201ENST00000417130 397 ntBASIC3.02□□□□□ -1.93
CTGFP29279 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.02□□□□□ -1.93
CTGFP29279 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.02□□□□□ -1.93
CTGFP29279 AL591806.2-201ENST00000433122 173 ntBASIC3.02□□□□□ -1.93
CTGFP29279 SRIP1-201ENST00000489235 288 ntBASIC3.02□□□□□ -1.93
CTGFP29279 RNU6-313P-201ENST00000516317 112 ntBASIC3.02□□□□□ -1.93
CTGFP29279 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
CTGFP29279 SNORA64.4-201ENST00000516632 81 ntBASIC3.02□□□□□ -1.93
CTGFP29279 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
CTGFP29279 AC009163.5-201ENST00000575421 637 ntBASIC3.02□□□□□ -1.93
CTGFP29279 AP001485.1-201ENST00000604799 199 ntBASIC3.02□□□□□ -1.93
CTGFP29279 AC019159.1-201ENST00000605094 187 ntBASIC3.02□□□□□ -1.93
CTGFP29279 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.02□□□□□ -1.93
CTGFP29279 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTGFP29279 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CTGFP29279 AC100821.1-201ENST00000523153 2479 ntBASIC3.01□□□□□ -1.93
CTGFP29279 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTGFP29279 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.01□□□□□ -1.93
CTGFP29279 RNU6-153P-201ENST00000364422 104 ntBASIC3.01□□□□□ -1.93
CTGFP29279 RNA5SP494-201ENST00000410653 129 ntBASIC3.01□□□□□ -1.93
CTGFP29279 RN7SKP192-201ENST00000411291 327 ntBASIC3.01□□□□□ -1.93
CTGFP29279 AC007969.2-201ENST00000441891 191 ntBASIC3.01□□□□□ -1.93
CTGFP29279 RNU7-23P-201ENST00000459465 62 ntBASIC3.01□□□□□ -1.93
CTGFP29279 RNU6-479P-201ENST00000516348 105 ntBASIC3.01□□□□□ -1.93
CTGFP29279 MIR4648-201ENST00000580107 72 ntBASIC3.01□□□□□ -1.93
CTGFP29279 AC060766.3-201ENST00000591442 263 ntBASIC3.01□□□□□ -1.93
CTGFP29279 RPS29P30-201ENST00000600975 111 ntBASIC3.01□□□□□ -1.93
CTGFP29279 AL356157.2-201ENST00000605122 111 ntBASIC3.01□□□□□ -1.93
CTGFP29279 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.01□□□□□ -1.93
CTGFP29279 MIR3529-201ENST00000637713 78 ntBASIC3.01□□□□□ -1.93
CTGFP29279 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CTGFP29279 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTGFP29279 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CTGFP29279 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
CTGFP29279 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTGFP29279 RNU6-923P-201ENST00000364753 107 ntBASIC3□□□□□ -1.93
CTGFP29279 SNORD50.2-201ENST00000365465 70 ntBASIC3□□□□□ -1.93
CTGFP29279 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3□□□□□ -1.93
CTGFP29279 SNORA46-201ENST00000384762 135 ntBASIC3□□□□□ -1.93
CTGFP29279 RNU6-1168P-201ENST00000390831 104 ntBASIC3□□□□□ -1.93
CTGFP29279 RNU5E-9P-201ENST00000411164 104 ntBASIC3□□□□□ -1.93
CTGFP29279 EIF1AXP1-201ENST00000419267 435 ntBASIC3□□□□□ -1.93
CTGFP29279 AC245291.1-201ENST00000419501 328 ntBASIC3□□□□□ -1.93
CTGFP29279 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3□□□□□ -1.93
CTGFP29279 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3□□□□□ -1.93
CTGFP29279 RPS15AP5-201ENST00000436276 388 ntBASIC3□□□□□ -1.93
CTGFP29279 AL161651.1-201ENST00000440882 223 ntBASIC3□□□□□ -1.93
CTGFP29279 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3□□□□□ -1.93
CTGFP29279 U8.22-201ENST00000459141 133 ntBASIC3□□□□□ -1.93
CTGFP29279 AC087477.1-201ENST00000465747 340 ntBASIC3□□□□□ -1.93
CTGFP29279 AC140059.1-201ENST00000489238 361 ntBASIC3□□□□□ -1.93
CTGFP29279 ACA59.2-201ENST00000517061 156 ntBASIC3□□□□□ -1.93
CTGFP29279 SNORA31.23-201ENST00000517219 133 ntBASIC3□□□□□ -1.93
CTGFP29279 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
CTGFP29279 MRPS18CP4-201ENST00000535821 231 ntBASIC3□□□□□ -1.93
CTGFP29279 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3□□□□□ -1.93
CTGFP29279 AC104581.2-201ENST00000572227 430 ntBASIC3□□□□□ -1.93
CTGFP29279 B3GNTL1P2-201ENST00000603673 288 ntBASIC3□□□□□ -1.93
CTGFP29279 AC011476.5-201ENST00000615594 130 ntBASIC3□□□□□ -1.93
CTGFP29279 MIR376A1-201ENST00000616574 68 ntBASIC3□□□□□ -1.93
CTGFP29279 U7.8-201ENST00000619968 63 ntBASIC3□□□□□ -1.93
CTGFP29279 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3□□□□□ -1.93
CTGFP29279 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CTGFP29279 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTGFP29279 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.99□□□□□ -1.93
CTGFP29279 RNY4P28-201ENST00000365281 93 ntBASIC2.99□□□□□ -1.93
CTGFP29279 RNU6-487P-201ENST00000365430 104 ntBASIC2.99□□□□□ -1.93
CTGFP29279 RNU6-968P-201ENST00000384076 107 ntBASIC2.99□□□□□ -1.93
CTGFP29279 RNU6-937P-201ENST00000384325 106 ntBASIC2.99□□□□□ -1.93
CTGFP29279 RNU6-843P-201ENST00000384454 104 ntBASIC2.99□□□□□ -1.93
CTGFP29279 SNORA12.2-201ENST00000391040 156 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms