Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNRPEP9-201ENST00000436794 238 ntBASIC4.09□□□□□ -1.75
RXRBP28702 SEPT7P4-201ENST00000437076 306 ntBASIC4.09□□□□□ -1.75
RXRBP28702 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.09□□□□□ -1.75
RXRBP28702 AL357552.1-201ENST00000445254 415 ntBASIC4.09□□□□□ -1.75
RXRBP28702 AC114982.1-201ENST00000469402 321 ntBASIC4.09□□□□□ -1.75
RXRBP28702 AC010409.1-201ENST00000487382 476 ntBASIC4.09□□□□□ -1.75
RXRBP28702 RPS29P21-201ENST00000496272 170 ntBASIC4.09□□□□□ -1.75
RXRBP28702 SNORA70.16-201ENST00000516390 95 ntBASIC4.09□□□□□ -1.75
RXRBP28702 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.09□□□□□ -1.75
RXRBP28702 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.09□□□□□ -1.75
RXRBP28702 MIR3145-201ENST00000580727 82 ntBASIC4.09□□□□□ -1.75
RXRBP28702 uc_338.25-201ENST00000613756 156 ntBASIC4.09□□□□□ -1.75
RXRBP28702 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
RXRBP28702 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.09□□□□□ -1.75
RXRBP28702 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RXRBP28702 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RXRBP28702 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RXRBP28702 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RXRBP28702 ZNF658B-202ENST00000615961 3375 ntBASIC4.09□□□□□ -1.76
RXRBP28702 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
RXRBP28702 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RXRBP28702 AC068647.1-201ENST00000489539 2265 ntBASIC4.09□□□□□ -1.76
RXRBP28702 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.08□□□□□ -1.76
RXRBP28702 Y_RNA.75-201ENST00000362927 97 ntBASIC4.08□□□□□ -1.76
RXRBP28702 Y_RNA.101-201ENST00000363154 102 ntBASIC4.08□□□□□ -1.76
RXRBP28702 Y_RNA.164-201ENST00000363709 102 ntBASIC4.08□□□□□ -1.76
RXRBP28702 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.08□□□□□ -1.76
RXRBP28702 RNU6-44P-201ENST00000384045 107 ntBASIC4.08□□□□□ -1.76
RXRBP28702 SNORA3.2-201ENST00000408221 125 ntBASIC4.08□□□□□ -1.76
RXRBP28702 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.08□□□□□ -1.76
RXRBP28702 RNU2-2P-201ENST00000410396 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 RNU6-1199P-201ENST00000411249 104 ntBASIC4.08□□□□□ -1.76
RXRBP28702 AC006989.1-201ENST00000427212 131 ntBASIC4.08□□□□□ -1.76
RXRBP28702 AL512844.2-201ENST00000433990 593 ntBASIC4.08□□□□□ -1.76
RXRBP28702 RPS15AP5-201ENST00000436276 388 ntBASIC4.08□□□□□ -1.76
RXRBP28702 AC124916.1-201ENST00000444020 547 ntBASIC4.08□□□□□ -1.76
RXRBP28702 AC005042.3-201ENST00000453230 174 ntBASIC4.08□□□□□ -1.76
RXRBP28702 SNORA70.19-201ENST00000516717 90 ntBASIC4.08□□□□□ -1.76
RXRBP28702 RNU6-1183P-201ENST00000517054 60 ntBASIC4.08□□□□□ -1.76
RXRBP28702 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.08□□□□□ -1.76
RXRBP28702 AP004607.1-201ENST00000524456 203 ntBASIC4.08□□□□□ -1.76
RXRBP28702 AC016256.1-201ENST00000547971 354 ntBASIC4.08□□□□□ -1.76
RXRBP28702 RNU2-4P-201ENST00000606190 192 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.15-201ENST00000611544 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.16-201ENST00000613119 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.12-201ENST00000613778 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.9-201ENST00000615427 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.11-201ENST00000616345 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.2-201ENST00000616535 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.3-201ENST00000617785 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.19-201ENST00000618602 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 RNU2-1-201ENST00000618664 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.6-201ENST00000619225 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.5-201ENST00000619465 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U2.10-201ENST00000620268 191 ntBASIC4.08□□□□□ -1.76
RXRBP28702 AC092628.2-201ENST00000622492 339 ntBASIC4.08□□□□□ -1.76
RXRBP28702 U6.99-201ENST00000637524 83 ntBASIC4.08□□□□□ -1.76
RXRBP28702 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RXRBP28702 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.07□□□□□ -1.76
RXRBP28702 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RXRBP28702 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RXRBP28702 Y_RNA.7-201ENST00000362352 102 ntBASIC4.07□□□□□ -1.76
RXRBP28702 RNA5SP99-201ENST00000364020 114 ntBASIC4.07□□□□□ -1.76
RXRBP28702 Y_RNA.218-201ENST00000364218 104 ntBASIC4.07□□□□□ -1.76
RXRBP28702 AL590383.1-201ENST00000428602 75 ntBASIC4.07□□□□□ -1.76
RXRBP28702 AC007969.2-201ENST00000441891 191 ntBASIC4.07□□□□□ -1.76
RXRBP28702 AP000705.1-201ENST00000454567 350 ntBASIC4.07□□□□□ -1.76
RXRBP28702 AC233702.2-202ENST00000562547 291 ntBASIC4.07□□□□□ -1.76
RXRBP28702 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.07□□□□□ -1.76
RXRBP28702 Y_RNA.778-201ENST00000620203 90 ntBASIC4.07□□□□□ -1.76
RXRBP28702 U2.21-201ENST00000637295 81 ntBASIC4.07□□□□□ -1.76
RXRBP28702 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RXRBP28702 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RXRBP28702 AC110491.1-201ENST00000562191 2010 ntBASIC4.07□□□□□ -1.76
RXRBP28702 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RXRBP28702 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.07□□□□□ -1.76
RXRBP28702 AC008568.2-201ENST00000623862 2313 ntBASIC4.06□□□□□ -1.76
RXRBP28702 AL353746.1-201ENST00000566293 6881 ntBASIC4.06□□□□□ -1.76
RXRBP28702 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RXRBP28702 RNU6-1272P-201ENST00000362776 107 ntBASIC4.06□□□□□ -1.76
RXRBP28702 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.06□□□□□ -1.76
RXRBP28702 SNORA67.4-201ENST00000384688 142 ntBASIC4.06□□□□□ -1.76
RXRBP28702 AC126124.2-201ENST00000413542 321 ntBASIC4.06□□□□□ -1.76
RXRBP28702 AC138623.1-201ENST00000418060 216 ntBASIC4.06□□□□□ -1.76
RXRBP28702 AC008267.6-201ENST00000441664 139 ntBASIC4.06□□□□□ -1.76
RXRBP28702 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.06□□□□□ -1.76
RXRBP28702 RPL23AP14-201ENST00000468281 468 ntBASIC4.06□□□□□ -1.76
RXRBP28702 RPS27AP9-201ENST00000477681 438 ntBASIC4.06□□□□□ -1.76
RXRBP28702 AC005840.1-201ENST00000498412 377 ntBASIC4.06□□□□□ -1.76
RXRBP28702 RNU2-58P-201ENST00000516403 183 ntBASIC4.06□□□□□ -1.76
RXRBP28702 RNA5SP309-201ENST00000516670 106 ntBASIC4.06□□□□□ -1.76
RXRBP28702 RNU6-1073P-201ENST00000517182 106 ntBASIC4.06□□□□□ -1.76
RXRBP28702 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.06□□□□□ -1.76
RXRBP28702 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.06□□□□□ -1.76
RXRBP28702 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RXRBP28702 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RXRBP28702 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RXRBP28702 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RXRBP28702 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.05□□□□□ -1.76
RXRBP28702 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms