Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
XRCC1P18887 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
XRCC1P18887 Y_RNA.9-201ENST00000362354 101 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 Y_RNA.41-201ENST00000362646 102 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 Y_RNA.100-201ENST00000363141 102 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 SNORD114-6-201ENST00000364393 72 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 RNU4-75P-201ENST00000364621 146 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 Y_RNA.373-201ENST00000365600 103 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 RNU6-1026P-201ENST00000384465 108 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 ZNF885P-201ENST00000420174 1098 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 AC007395.1-201ENST00000451333 677 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 AC016925.1-201ENST00000458303 298 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 RNA5SP57-201ENST00000459463 123 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 AC096745.1-201ENST00000509945 370 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.59□□□□□ -2.15
XRCC1P18887 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.59□□□□□ -2.15
XRCC1P18887 RNA5SP458-201ENST00000516188 119 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 GNAI2P1-201ENST00000541815 315 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.59□□□□□ -2.15
XRCC1P18887 EIF1P4-201ENST00000572664 335 ntBASIC1.59□□□□□ -2.15
XRCC1P18887 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
XRCC1P18887 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.59□□□□□ -2.16
XRCC1P18887 RNU6-451P-201ENST00000362921 107 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 Y_RNA.123-201ENST00000363338 102 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 RNU6-457P-201ENST00000363999 107 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 Y_RNA.256-201ENST00000364594 104 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 Y_RNA.402-201ENST00000383972 102 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 RNU6-968P-201ENST00000384076 107 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 RNU6-784P-201ENST00000384330 106 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 MIR300-201ENST00000401138 83 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 RNA5SP494-201ENST00000410653 129 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 RNU6-373P-201ENST00000411247 98 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 MTCO1P21-201ENST00000416634 589 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.58□□□□□ -2.16
XRCC1P18887 SNRPEP8-201ENST00000442866 260 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 AC112492.4-201ENST00000456549 352 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 Y_RNA.638-201ENST00000459374 113 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 HMGN2P26-201ENST00000463169 339 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
XRCC1P18887 Y_RNA.665-201ENST00000516177 98 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.58□□□□□ -2.16
XRCC1P18887 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.58□□□□□ -2.16
XRCC1P18887 AC010900.2-201ENST00000604508 210 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 CTHRC1P1-201ENST00000605383 469 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.58□□□□□ -2.16
XRCC1P18887 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.58□□□□□ -2.16
XRCC1P18887 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
XRCC1P18887 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 MIR521-1-201ENST00000384902 87 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
XRCC1P18887 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 USP9YP28-201ENST00000435142 589 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC1P18887 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC1P18887 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
XRCC1P18887 RNU6-720P-201ENST00000516363 108 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC1P18887 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC1P18887 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.57□□□□□ -2.16
XRCC1P18887 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.57□□□□□ -2.16
XRCC1P18887 BNIP3P10-201ENST00000605360 577 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.57□□□□□ -2.16
XRCC1P18887 AC104458.1-201ENST00000608243 463 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 AF250324.2-201ENST00000608299 610 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 AL133215.3-201ENST00000609801 448 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.57□□□□□ -2.16
XRCC1P18887 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
XRCC1P18887 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
XRCC1P18887 MIR340-201ENST00000362125 95 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 Y_RNA.38-201ENST00000362617 102 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 Y_RNA.132-201ENST00000363421 102 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 Y_RNA.140-201ENST00000363474 103 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 RNY4P14-201ENST00000363656 96 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 RNU4-40P-201ENST00000364351 143 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 Y_RNA.573-201ENST00000384763 105 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 Y_RNA.615-201ENST00000410769 117 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 VN1R36P-201ENST00000414936 291 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 AC139712.2-201ENST00000424302 339 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 snoU13.6-201ENST00000458785 104 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 MTND1P5-201ENST00000517906 940 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.56□□□□□ -2.16
XRCC1P18887 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.56□□□□□ -2.16
XRCC1P18887 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.56□□□□□ -2.16
XRCC1P18887 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.56□□□□□ -2.16
XRCC1P18887 TCL6_2.1-201ENST00000615162 119 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 AC005562.2-201ENST00000618264 111 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.56□□□□□ -2.16
XRCC1P18887 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
XRCC1P18887 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
XRCC1P18887 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
XRCC1P18887 MTND5P9-201ENST00000503854 1755 ntBASIC1.55□□□□□ -2.16
XRCC1P18887 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.55□□□□□ -2.16
XRCC1P18887 SNORA18.2-201ENST00000383865 132 ntBASIC1.55□□□□□ -2.16
XRCC1P18887 U8.10-201ENST00000384260 133 ntBASIC1.55□□□□□ -2.16
XRCC1P18887 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
XRCC1P18887 MIR320B2-201ENST00000408479 138 ntBASIC1.55□□□□□ -2.16
XRCC1P18887 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms