Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.47□□□□□ -2.33
UBBP0CG47 AC005840.1-201ENST00000498412 377 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 TRMT112P2-201ENST00000512910 132 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 RNU7-128P-201ENST00000517247 62 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 AC024995.1-201ENST00000523014 93 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 AC004812.1-201ENST00000540773 146 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.47□□□□□ -2.33
UBBP0CG47 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.47□□□□□ -2.33
UBBP0CG47 AC109446.2-201ENST00000567872 497 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.47□□□□□ -2.33
UBBP0CG47 AC091805.2-201ENST00000603848 235 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 AC245060.5-201ENST00000610778 3293 ntBASIC0.47□□□□□ -2.33
UBBP0CG47 MTND4P9-201ENST00000507819 1346 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
UBBP0CG47 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.46□□□□□ -2.34
UBBP0CG47 Y_RNA.480-201ENST00000384364 102 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 RNU4-46P-201ENST00000410818 138 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 MTND3P17-201ENST00000416968 344 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.46□□□□□ -2.34
UBBP0CG47 AC010154.1-201ENST00000425857 269 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.46□□□□□ -2.34
UBBP0CG47 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.46□□□□□ -2.34
UBBP0CG47 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.46□□□□□ -2.34
UBBP0CG47 AL031274.1-201ENST00000450334 232 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 snoU13.6-201ENST00000458785 104 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 SNORA31.4-201ENST00000516049 129 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 RNU6-1069P-201ENST00000516612 133 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 RNU6-410P-201ENST00000517006 107 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 AC090142.3-201ENST00000519012 385 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 AL121579.1-201ENST00000555129 305 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.46□□□□□ -2.34
UBBP0CG47 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.46□□□□□ -2.34
UBBP0CG47 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.46□□□□□ -2.34
UBBP0CG47 AC080078.2-201ENST00000603766 501 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
UBBP0CG47 AC139792.3-201ENST00000623525 224 ntBASIC0.46□□□□□ -2.34
UBBP0CG47 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
UBBP0CG47 RNU6-1287P-201ENST00000362914 107 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 RNU5B-2P-201ENST00000363036 113 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 RNU6-1029P-201ENST00000384109 107 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 SNORA67.2-201ENST00000384300 149 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 RNU6-1060P-201ENST00000384664 107 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 MIR520E-201ENST00000384867 87 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 MIR653-201ENST00000385279 96 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 RNA5SP467-201ENST00000391274 118 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 Y_RNA.595-201ENST00000410403 105 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 RPS26P42-201ENST00000413485 326 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 SSR1P2-201ENST00000415208 787 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.45□□□□□ -2.34
UBBP0CG47 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.45□□□□□ -2.34
UBBP0CG47 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.45□□□□□ -2.34
UBBP0CG47 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.45□□□□□ -2.34
UBBP0CG47 RPS29P27-201ENST00000463711 170 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 SRRM1P2-201ENST00000464531 1192 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 AK3P2-201ENST00000507976 429 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.45□□□□□ -2.34
UBBP0CG47 FABP5P5-201ENST00000515537 406 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 Vault.3-201ENST00000516676 95 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 MRPS36P3-201ENST00000519284 130 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 MIR4498-201ENST00000577599 66 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 MIR4703-201ENST00000577728 79 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 AL022161.1-201ENST00000604390 213 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 BNIP3P10-201ENST00000605360 577 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 AC005562.2-201ENST00000618264 111 ntBASIC0.45□□□□□ -2.34
UBBP0CG47 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
UBBP0CG47 RNY1P10-201ENST00000363268 113 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 RNU6-108P-201ENST00000365558 107 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 RNU6-393P-201ENST00000384475 107 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 RNU6-417P-201ENST00000384712 107 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 MIR549A-201ENST00000385268 96 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 RPS26P5-201ENST00000418544 335 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 AC009961.2-201ENST00000435771 251 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.44□□□□□ -2.34
UBBP0CG47 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 ZNF114P1-201ENST00000453500 292 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.44□□□□□ -2.34
UBBP0CG47 RPS29P15-201ENST00000458329 171 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.44□□□□□ -2.34
UBBP0CG47 AC105758.1-201ENST00000506038 399 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 RNU6-922P-201ENST00000516753 99 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.44□□□□□ -2.34
UBBP0CG47 AC016256.1-201ENST00000547971 354 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 AC008015.1-201ENST00000555505 465 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 MTND1P8-201ENST00000571424 950 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.44□□□□□ -2.34
UBBP0CG47 AL513534.2-201ENST00000603836 250 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.44□□□□□ -2.34
UBBP0CG47 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.44□□□□□ -2.34
UBBP0CG47 AP000240.1-201ENST00000609910 452 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 AC008873.1-201ENST00000625051 138 ntBASIC0.44□□□□□ -2.34
UBBP0CG47 Y_RNA.399-201ENST00000383955 105 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 RNU6-17P-201ENST00000384245 107 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 RNU6-18P-201ENST00000384527 107 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 MIR200A-201ENST00000384875 90 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 SNORD70.1-201ENST00000391007 85 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 RNU6-1093P-201ENST00000391194 107 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms