Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU6-769P-201ENST00000384407 104 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.25□□□□□ -2.37
FREM3P0C091 BET1P1-201ENST00000482276 359 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
FREM3P0C091 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.25□□□□□ -2.37
FREM3P0C091 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.25□□□□□ -2.37
FREM3P0C091 AL158042.1-201ENST00000605338 460 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.25□□□□□ -2.37
FREM3P0C091 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
FREM3P0C091 MTND4P5-201ENST00000435821 1374 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 CASC19-280ENST00000642102 1351 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 AC121333.1-201ENST00000567488 2709 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
FREM3P0C091 RNU6-413P-201ENST00000384115 107 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 Y_RNA.518-201ENST00000384552 113 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 RPS26P5-201ENST00000418544 335 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.25□□□□□ -2.37
FREM3P0C091 HSPE1P23-201ENST00000509838 286 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 EIF4A1P12-201ENST00000551910 141 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 AC009994.1-201ENST00000606889 253 ntBASIC0.25□□□□□ -2.37
FREM3P0C091 RNU6-969P-201ENST00000383900 105 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AL451046.2-201ENST00000403074 277 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AC010154.1-201ENST00000425857 269 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AC078809.1-201ENST00000427601 140 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 SNAP23P1-201ENST00000433229 246 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.24□□□□□ -2.37
FREM3P0C091 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.24□□□□□ -2.37
FREM3P0C091 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.24□□□□□ -2.37
FREM3P0C091 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.24□□□□□ -2.37
FREM3P0C091 EIF1P4-201ENST00000572664 335 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 MIR5006-201ENST00000583027 110 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AL356157.2-201ENST00000605122 111 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AP001596.2-201ENST00000608410 312 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 uc_338.11-201ENST00000619132 160 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AC106754.2-201ENST00000623006 233 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AL603839.4-201ENST00000624658 1005 ntBASIC0.24□□□□□ -2.37
FREM3P0C091 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.24□□□□□ -2.37
FREM3P0C091 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
FREM3P0C091 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 RNU2-8P-201ENST00000410727 190 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.23□□□□□ -2.37
FREM3P0C091 RPL22P18-201ENST00000417197 377 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.23□□□□□ -2.37
FREM3P0C091 AL606517.2-201ENST00000442855 241 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.23□□□□□ -2.37
FREM3P0C091 AL163973.1-201ENST00000484753 577 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.23□□□□□ -2.37
FREM3P0C091 RNU6-1069P-201ENST00000516612 133 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.23□□□□□ -2.37
FREM3P0C091 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.23□□□□□ -2.37
FREM3P0C091 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AL162424.1-201ENST00000602325 221 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 PART1_2.1-201ENST00000612397 250 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AL357075.2-201ENST00000614906 189 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AC131159.1-201ENST00000621854 213 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AC023934.1-201ENST00000574529 2389 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
FREM3P0C091 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
FREM3P0C091 RNU6-371P-201ENST00000364283 108 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 SNORA75.2-201ENST00000391138 150 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 SNORA75.3-201ENST00000391231 150 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AC019070.1-201ENST00000415008 1024 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AL031313.1-201ENST00000448435 256 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AC024995.1-201ENST00000523014 93 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AC073539.2-201ENST00000597113 165 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AL592221.1-201ENST00000605266 382 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 AC097065.2-201ENST00000608159 533 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.23□□□□□ -2.37
FREM3P0C091 RNU6-418P-201ENST00000384035 107 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 MIR549A-201ENST00000385268 96 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 SNORA16.2-201ENST00000390991 127 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.22□□□□□ -2.37
FREM3P0C091 MTCO3P18-201ENST00000440206 761 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.22□□□□□ -2.37
FREM3P0C091 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.22□□□□□ -2.37
FREM3P0C091 LINC01399-202ENST00000458450 244 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.22□□□□□ -2.37
FREM3P0C091 MTCO3P7-201ENST00000510008 774 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AC103996.1-201ENST00000555468 102 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 MIR5589-201ENST00000579442 60 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 MIR4305-201ENST00000583252 102 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 Z99289.3-201ENST00000605586 594 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AP002360.4-201ENST00000606980 481 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AC240442.1-201ENST00000616055 283 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AC006001.4-201ENST00000622243 395 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AL157786.1-207ENST00000627771 695 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.22□□□□□ -2.37
FREM3P0C091 AC100810.6-201ENST00000638068 285 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.22□□□□□ -2.37
FREM3P0C091 SNORD56.2-201ENST00000363242 71 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 U3.9-201ENST00000363823 204 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 RNU4-1-201ENST00000363925 141 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 RNU6-877P-201ENST00000383868 107 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 RNU6-641P-201ENST00000384006 107 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 SNORD116-13-201ENST00000384408 92 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 RNU6-1031P-201ENST00000384773 107 ntBASIC0.22□□□□□ -2.37
FREM3P0C091 RNU6-298P-201ENST00000390888 96 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms