Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC114482.1-201ENST00000418010 247 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC6P09630 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC6P09630 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXC6P09630 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC6P09630 RPL30P12-201ENST00000474666 353 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 AP001025.1-201ENST00000486139 332 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXC6P09630 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC6P09630 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC6P09630 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC6P09630 RPL23AP78-201ENST00000599928 470 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 Z98751.3-201ENST00000604447 521 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXC6P09630 AL021879.1-201ENST00000611756 288 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 U4.1-201ENST00000620349 87 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 AC002064.3-201ENST00000623448 346 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC6P09630 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC6P09630 Y_RNA.64-201ENST00000362845 102 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 SNORD32A-201ENST00000364805 84 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 Y_RNA.380-201ENST00000365663 111 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 RNU6-968P-201ENST00000384076 107 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 ELOCP20-201ENST00000422460 345 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 Z98742.2-201ENST00000431564 187 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 AC124916.1-201ENST00000444020 547 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 AC006026.2-201ENST00000457376 180 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 RN7SKP210-201ENST00000459176 261 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 MED28P2-201ENST00000475771 317 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXC6P09630 RNU7-175P-201ENST00000515915 61 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 ACA59.2-201ENST00000517061 156 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 AL161670.1-201ENST00000554348 137 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 7SK.7-201ENST00000603504 247 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 AL355297.3-201ENST00000604082 446 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 RAC1P9-201ENST00000604990 392 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 AC019159.1-201ENST00000605094 187 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 PRR13P7-201ENST00000605538 430 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 AC024581.2-201ENST00000619986 252 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 SNORA43.4-201ENST00000629559 138 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC6P09630 MIR3199-2-201ENST00000636243 86 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 ZNF355P-201ENST00000427301 3216 ntBASIC2.6□□□□□ -1.99
HOXC6P09630 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
HOXC6P09630 RNU6-222P-201ENST00000362438 107 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 SNORA29-201ENST00000384183 140 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 SNORA36A-201ENST00000384221 132 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 Y_RNA.504-201ENST00000384481 104 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 SNORA64-201ENST00000384674 134 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 MIR487A-201ENST00000385009 80 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 RPL21P1-201ENST00000399532 476 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 RNU2-49P-201ENST00000410666 184 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 RNU6-1245P-201ENST00000411130 106 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AL358453.1-201ENST00000422522 250 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC6P09630 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC6P09630 PCNPP5-201ENST00000452246 481 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC6P09630 snoU13.30-201ENST00000458951 104 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AF186996.7-201ENST00000492781 209 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AC110588.1-201ENST00000559699 137 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AC090517.1-201ENST00000569307 266 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AC104581.2-201ENST00000572227 430 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC6P09630 AL159153.1-201ENST00000619688 317 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 MIR219B-201ENST00000637023 88 ntBASIC2.59□□□□□ -1.99
HOXC6P09630 AC138915.1-201ENST00000565427 1685 ntBASIC2.59□□□□□ -2
HOXC6P09630 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.59□□□□□ -2
HOXC6P09630 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXC6P09630 Y_RNA.396-201ENST00000383949 103 ntBASIC2.58□□□□□ -2
HOXC6P09630 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
HOXC6P09630 MIR32-201ENST00000384965 70 ntBASIC2.58□□□□□ -2
HOXC6P09630 MIR628-201ENST00000385229 95 ntBASIC2.58□□□□□ -2
HOXC6P09630 FO393413.1-201ENST00000402892 195 ntBASIC2.58□□□□□ -2
HOXC6P09630 MIR1302-3-201ENST00000408128 138 ntBASIC2.58□□□□□ -2
HOXC6P09630 RPS15AP5-201ENST00000436276 388 ntBASIC2.58□□□□□ -2
HOXC6P09630 AL161651.1-201ENST00000440882 223 ntBASIC2.58□□□□□ -2
HOXC6P09630 AC009296.1-201ENST00000443146 155 ntBASIC2.58□□□□□ -2
HOXC6P09630 OSTCP8-201ENST00000445117 448 ntBASIC2.58□□□□□ -2
HOXC6P09630 AC104564.1-201ENST00000493028 407 ntBASIC2.58□□□□□ -2
HOXC6P09630 AC010469.2-201ENST00000496412 480 ntBASIC2.58□□□□□ -2
HOXC6P09630 RNY3P15-201ENST00000516297 97 ntBASIC2.58□□□□□ -2
HOXC6P09630 HSPE1P4-201ENST00000550617 308 ntBASIC2.58□□□□□ -2
HOXC6P09630 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.58□□□□□ -2
HOXC6P09630 AC004817.2-201ENST00000561794 651 ntBASIC2.58□□□□□ -2
HOXC6P09630 RPS29P30-201ENST00000600975 111 ntBASIC2.58□□□□□ -2
HOXC6P09630 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HOXC6P09630 RBBP8P1-201ENST00000449447 1844 ntBASIC2.58□□□□□ -2
HOXC6P09630 AC099654.7-201ENST00000635788 2127 ntBASIC2.57□□□□□ -2
HOXC6P09630 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.57□□□□□ -2
HOXC6P09630 RNU6-702P-201ENST00000364982 107 ntBASIC2.57□□□□□ -2
HOXC6P09630 Y_RNA.471-201ENST00000384312 102 ntBASIC2.57□□□□□ -2
HOXC6P09630 RNU6-843P-201ENST00000384454 104 ntBASIC2.57□□□□□ -2
HOXC6P09630 RNU6-1222P-201ENST00000384615 107 ntBASIC2.57□□□□□ -2
HOXC6P09630 Y_RNA.551-201ENST00000384661 102 ntBASIC2.57□□□□□ -2
HOXC6P09630 RNU6-130P-201ENST00000411112 103 ntBASIC2.57□□□□□ -2
HOXC6P09630 AL365496.1-201ENST00000426885 215 ntBASIC2.57□□□□□ -2
HOXC6P09630 AL445305.1-201ENST00000432577 575 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms