Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MTND1P27-201ENST00000451117 902 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 RPL9P9-202ENST00000466501 579 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 SNORD27.1-201ENST00000516319 72 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 RNA5SP330-201ENST00000517096 96 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.84□□□□□ -2.28
COL4A2P08572 MIR3913-1-201ENST00000577744 102 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.84□□□□□ -2.28
COL4A2P08572 MIR4422-201ENST00000581938 83 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 AC087683.1-201ENST00000591187 441 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 PRR13P7-201ENST00000605538 430 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 AL590240.4-201ENST00000616908 390 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.84□□□□□ -2.28
COL4A2P08572 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
COL4A2P08572 RNU6-112P-201ENST00000363599 104 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 RNU6-827P-201ENST00000365553 106 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 RNU2-9P-201ENST00000410194 145 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 RN7SKP61-201ENST00000410642 295 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 RPL21P111-201ENST00000418453 477 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A2P08572 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A2P08572 SNAP23P1-201ENST00000433229 246 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
COL4A2P08572 snoU13.9-201ENST00000458927 103 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 MTCO2P6-201ENST00000463134 685 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 BET1P1-201ENST00000482276 359 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 AC079140.2-201ENST00000506193 142 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 AC097473.1-201ENST00000508142 408 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 RNU6-567P-201ENST00000516746 107 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 RNU6-1098P-201ENST00000516772 96 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 MTCO2P4-201ENST00000517968 247 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 MIR4528-201ENST00000577763 90 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A2P08572 AC064807.4-201ENST00000607201 407 ntBASIC0.83□□□□□ -2.28
COL4A2P08572 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.83□□□□□ -2.28
COL4A2P08572 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.83□□□□□ -2.28
COL4A2P08572 MIR330-201ENST00000362196 94 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 RNU4-21P-201ENST00000362802 126 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 Y_RNA.67-201ENST00000362870 100 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 Y_RNA.85-201ENST00000363014 111 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 Y_RNA.201-201ENST00000364052 96 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 RNU6-1019P-201ENST00000364424 107 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 SNORA16.2-201ENST00000390991 127 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
COL4A2P08572 MIR1267-201ENST00000408723 78 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.82□□□□□ -2.28
COL4A2P08572 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A2P08572 MTATP6P18-201ENST00000417994 673 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC133104.1-201ENST00000429100 218 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 C8orf59P1-201ENST00000429930 303 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.82□□□□□ -2.28
COL4A2P08572 AC007547.1-201ENST00000462177 490 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.82□□□□□ -2.28
COL4A2P08572 AC010493.1-201ENST00000513479 292 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 RNU2-69P-201ENST00000516061 100 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AP002963.1-201ENST00000530590 184 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A2P08572 MTCO3P23-201ENST00000561363 289 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC110760.3-201ENST00000598794 467 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC078795.3-201ENST00000602913 472 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC002044.1-201ENST00000606707 158 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
COL4A2P08572 AC087683.2-201ENST00000611384 326 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC136475.10-201ENST00000620253 385 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC120349.3-201ENST00000624377 529 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC005609.4-201ENST00000625071 447 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 AC010487.4-201ENST00000637027 61 ntBASIC0.82□□□□□ -2.28
COL4A2P08572 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COL4A2P08572 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COL4A2P08572 Y_RNA.159-201ENST00000363674 87 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 Y_RNA.169-201ENST00000363745 96 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 SNORD31B-201ENST00000364977 69 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 RNU6-282P-201ENST00000365357 103 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 Y_RNA.399-201ENST00000383955 105 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 Y_RNA.504-201ENST00000384481 104 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC012306.1-201ENST00000423267 114 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 MTCO2P11-201ENST00000431069 680 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 HSPE1P21-201ENST00000438283 308 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 MTCO2P3-201ENST00000442543 421 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AL031274.1-201ENST00000450334 232 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC087477.1-201ENST00000465747 340 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A2P08572 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.81□□□□□ -2.28
COL4A2P08572 HMGB1P33-201ENST00000563485 527 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A2P08572 AC012414.6-201ENST00000568241 401 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 RNU6-85P-201ENST00000605989 107 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 AC104458.1-201ENST00000608243 463 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL4A2P08572 MIR424-201ENST00000362227 98 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 RNU6-545P-201ENST00000362681 104 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 RNU6-562P-201ENST00000362731 107 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 Y_RNA.258-201ENST00000364613 105 ntBASIC0.81□□□□□ -2.28
COL4A2P08572 SNORD26-201ENST00000384147 75 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms