Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
HLA-DQB2P05538 HSBP1P2-201ENST00000299671 229 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 SNORD114-24-201ENST00000365029 72 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 RNU5E-5P-201ENST00000365379 116 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 RNU6-1235P-201ENST00000384559 107 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 RNU6-1031P-201ENST00000384773 107 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 SNORD12-201ENST00000391002 90 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 RNA5SP109-201ENST00000391010 116 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC063976.4-201ENST00000421971 163 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC011233.1-201ENST00000422812 283 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AL356583.2-201ENST00000426536 280 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC073614.1-201ENST00000438690 650 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC016717.1-201ENST00000448918 286 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 USP9YP12-201ENST00000450481 570 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 RNU6-498P-201ENST00000459468 107 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC092991.1-201ENST00000477176 376 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC010486.2-201ENST00000505572 483 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 SNORA31.4-201ENST00000516049 129 ntBASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.59□□□□□ -2.31
HLA-DQB2P05538 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.59□□□□□ -2.31
HLA-DQB2P05538 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.59□□□□□ -2.31
HLA-DQB2P05538 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.59□□□□□ -2.31
HLA-DQB2P05538 Y_RNA.124-201ENST00000363339 93 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 RNU5F-7P-201ENST00000363696 115 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 Y_RNA.480-201ENST00000384364 102 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 MIR608-201ENST00000384820 100 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 RNU6-1093P-201ENST00000391194 107 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC090960.1-201ENST00000421072 306 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 MTCO2P23-201ENST00000425216 680 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC010154.1-201ENST00000425857 269 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC002429.1-201ENST00000437672 148 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AL606517.2-201ENST00000442855 241 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC048334.1-201ENST00000477975 159 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC079382.1-201ENST00000493346 557 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 PDCD5P2-201ENST00000507570 312 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 SNORD27.1-201ENST00000516319 72 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 SNORA31.10-201ENST00000516482 106 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 RNU2-46P-201ENST00000517038 113 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC024995.1-201ENST00000523014 93 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 MIR4775-201ENST00000581168 75 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 MIR4753-201ENST00000585119 83 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AL390123.1-201ENST00000603216 237 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC104458.1-201ENST00000608243 463 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.58□□□□□ -2.32
HLA-DQB2P05538 AC007671.2-201ENST00000637344 619 ntBASIC0.58□□□□□ -2.32
HLA-DQB2P05538 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
HLA-DQB2P05538 Y_RNA.226-201ENST00000364337 114 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 Y_RNA.238-201ENST00000364441 102 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 Y_RNA.287-201ENST00000364853 94 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 RNU6-975P-201ENST00000384296 105 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 RNU6-950P-201ENST00000384651 107 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 MIR513B-201ENST00000385136 84 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AC098592.1-201ENST00000419352 333 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AL596276.1-201ENST00000434465 418 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 RNU6-322P-201ENST00000516010 103 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 RNU2-69P-201ENST00000516061 100 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 SNORD79.1-201ENST00000516069 84 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 RNU6-948P-201ENST00000516374 107 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 RNU6-410P-201ENST00000517006 107 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AC136628.3-201ENST00000521868 290 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AP003072.2-201ENST00000527756 676 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AL590705.4-201ENST00000532209 134 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AC022432.1-201ENST00000595739 310 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AC008751.2-201ENST00000597885 980 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 AL133173.2-201ENST00000614270 90 ntBASIC0.57□□□□□ -2.32
HLA-DQB2P05538 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 Y_RNA.363-201ENST00000365529 113 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 RNU6-74P-201ENST00000384235 107 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 RNU6-505P-201ENST00000384427 107 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 RNU6-417P-201ENST00000384712 107 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 MIR454-201ENST00000390180 115 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 RNU4-46P-201ENST00000410818 138 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AC245047.7-201ENST00000440265 293 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.56□□□□□ -2.32
HLA-DQB2P05538 EPS15P1-201ENST00000448836 336 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 SNRPGP9-201ENST00000456025 225 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 Vault.3-201ENST00000516676 95 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 RNU6-922P-201ENST00000516753 99 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AC090142.3-201ENST00000519012 385 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AL121579.1-201ENST00000555129 305 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 MTCO3P23-201ENST00000561363 289 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AL513534.2-201ENST00000603836 250 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AC002044.1-201ENST00000606707 158 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 MIR7844-201ENST00000616161 122 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 AC006001.4-201ENST00000622243 395 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 U6.108-201ENST00000637764 58 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 MTND4P9-201ENST00000507819 1346 ntBASIC0.56□□□□□ -2.32
HLA-DQB2P05538 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.55□□□□□ -2.32
HLA-DQB2P05538 RNU6-393P-201ENST00000384475 107 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 MIR200A-201ENST00000384875 90 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms