Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.55□□□□□ -2.5
APOBP04114 MIR101-2-201ENST00000362195 79 ntBASIC-0.55□□□□□ -2.5
APOBP04114 MT-TY-201ENST00000387409 66 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNU2-15P-201ENST00000410692 191 ntBASIC-0.55□□□□□ -2.5
APOBP04114 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.55□□□□□ -2.5
APOBP04114 USP9YP21-201ENST00000420603 432 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RPL31P53-201ENST00000457065 348 ntBASIC-0.55□□□□□ -2.5
APOBP04114 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.55□□□□□ -2.5
APOBP04114 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.55□□□□□ -2.5
APOBP04114 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.56□□□□□ -2.5
APOBP04114 RNU6-127P-201ENST00000390897 107 ntBASIC-0.56□□□□□ -2.5
APOBP04114 RNY4P36-201ENST00000391116 96 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AL109755.1-201ENST00000401791 649 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.56□□□□□ -2.5
APOBP04114 RNA5SP470-201ENST00000516463 106 ntBASIC-0.56□□□□□ -2.5
APOBP04114 RNU6-180P-201ENST00000516697 61 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AL442163.3-201ENST00000554110 156 ntBASIC-0.56□□□□□ -2.5
APOBP04114 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
APOBP04114 RNU4-36P-201ENST00000364294 144 ntBASIC-0.56□□□□□ -2.5
APOBP04114 RNU6-438P-201ENST00000365561 103 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AC093303.1-201ENST00000514549 295 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AL671309.1-201ENST00000603750 544 ntBASIC-0.56□□□□□ -2.5
APOBP04114 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.56□□□□□ -2.5
APOBP04114 MIR7844-201ENST00000616161 122 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AC079416.3-201ENST00000624479 549 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AC019226.1-201ENST00000625666 515 ntBASIC-0.56□□□□□ -2.5
APOBP04114 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.56□□□□□ -2.5
APOBP04114 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.56□□□□□ -2.5
APOBP04114 MIR573-201ENST00000384964 99 ntBASIC-0.56□□□□□ -2.5
APOBP04114 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
APOBP04114 RNU6-287P-201ENST00000516230 98 ntBASIC-0.56□□□□□ -2.5
APOBP04114 BCRP9-201ENST00000605312 388 ntBASIC-0.56□□□□□ -2.5
APOBP04114 AC009268.2-201ENST00000621925 457 ntBASIC-0.56□□□□□ -2.5
APOBP04114 MTND5P17-201ENST00000418405 1603 ntBASIC-0.56□□□□□ -2.5
APOBP04114 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-975P-201ENST00000384296 105 ntBASIC-0.57□□□□□ -2.5
APOBP04114 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AC087499.4-201ENST00000448505 178 ntBASIC-0.57□□□□□ -2.5
APOBP04114 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.57□□□□□ -2.5
APOBP04114 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-202P-201ENST00000515998 96 ntBASIC-0.57□□□□□ -2.5
APOBP04114 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-922P-201ENST00000516753 99 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AC105036.1-201ENST00000566222 271 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.57□□□□□ -2.5
APOBP04114 AC093875.1-201ENST00000623688 504 ntBASIC-0.57□□□□□ -2.5
APOBP04114 Y_RNA.62-201ENST00000362840 99 ntBASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-116P-201ENST00000384042 109 ntBASIC-0.57□□□□□ -2.5
APOBP04114 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-881P-201ENST00000516813 102 ntBASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-840P-201ENST00000517275 65 ntBASIC-0.57□□□□□ -2.5
APOBP04114 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.57□□□□□ -2.5
APOBP04114 uc_338.19-201ENST00000616808 99 ntBASIC-0.57□□□□□ -2.5
APOBP04114 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.57□□□□□ -2.5
APOBP04114 PCNPP3-201ENST00000393579 471 ntBASIC-0.57□□□□□ -2.5
APOBP04114 CCDC58P2-201ENST00000417131 366 ntBASIC-0.57□□□□□ -2.5
APOBP04114 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AC008494.2-201ENST00000514544 370 ntBASIC-0.57□□□□□ -2.5
APOBP04114 MIR4306-201ENST00000583390 91 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AP000676.3-201ENST00000623299 569 ntBASIC-0.57□□□□□ -2.5
APOBP04114 SCARNA4-202ENST00000625402 129 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AL590396.4-201ENST00000636779 956 ntBASIC-0.57□□□□□ -2.5
APOBP04114 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.57□□□□□ -2.5
APOBP04114 SNORA72.1-201ENST00000363485 129 ntBASIC-0.57□□□□□ -2.5
APOBP04114 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
APOBP04114 HMGN2P26-201ENST00000463169 339 ntBASIC-0.57□□□□□ -2.5
APOBP04114 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.57□□□□□ -2.5
APOBP04114 BNIP3P6-201ENST00000549284 499 ntBASIC-0.57□□□□□ -2.5
APOBP04114 VN1R83P-201ENST00000595685 445 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AC246785.4-201ENST00000605374 287 ntBASIC-0.57□□□□□ -2.5
APOBP04114 AL391903.3-201ENST00000612158 163 ntBASIC-0.57□□□□□ -2.5
APOBP04114 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.57□□□□□ -2.5
APOBP04114 RNA5SP117-201ENST00000365294 118 ntBASIC-0.58□□□□□ -2.5
APOBP04114 MIR1827-201ENST00000408549 66 ntBASIC-0.58□□□□□ -2.5
APOBP04114 MTCO3P41-201ENST00000414801 328 ntBASIC-0.58□□□□□ -2.5
APOBP04114 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.58□□□□□ -2.5
APOBP04114 AC024405.2-202ENST00000532731 184 ntBASIC-0.58□□□□□ -2.5
APOBP04114 AC100830.2-201ENST00000581636 240 ntBASIC-0.58□□□□□ -2.5
APOBP04114 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.58□□□□□ -2.5
APOBP04114 SNORA2.2-201ENST00000365473 135 ntBASIC-0.58□□□□□ -2.5
APOBP04114 SNORD83.1-201ENST00000411362 77 ntBASIC-0.58□□□□□ -2.5
APOBP04114 AC006366.1-201ENST00000422002 759 ntBASIC-0.58□□□□□ -2.5
APOBP04114 AL356583.2-201ENST00000426536 280 ntBASIC-0.58□□□□□ -2.5
APOBP04114 GPM6BP2-201ENST00000432046 144 ntBASIC-0.58□□□□□ -2.5
APOBP04114 GPM6BP1-201ENST00000446387 144 ntBASIC-0.58□□□□□ -2.5
APOBP04114 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.58□□□□□ -2.5
APOBP04114 AL034555.1-201ENST00000604816 211 ntBASIC-0.58□□□□□ -2.5
APOBP04114 RNU6-94P-201ENST00000607728 107 ntBASIC-0.58□□□□□ -2.5
APOBP04114 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.58□□□□□ -2.5
APOBP04114 MIR4499-201ENST00000584834 69 ntBASIC-0.58□□□□□ -2.5
APOBP04114 MIR548H2-201ENST00000408874 88 ntBASIC-0.59□□□□□ -2.5
APOBP04114 snoU13.30-201ENST00000458951 104 ntBASIC-0.59□□□□□ -2.5
APOBP04114 snoU13.27-201ENST00000459278 104 ntBASIC-0.59□□□□□ -2.5
APOBP04114 RNU6-927P-201ENST00000516199 100 ntBASIC-0.59□□□□□ -2.5
APOBP04114 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.59□□□□□ -2.5
APOBP04114 AC245008.1-201ENST00000608123 476 ntBASIC-0.59□□□□□ -2.5
APOBP04114 AC006441.5-201ENST00000612680 209 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms