Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.1□□□□□ -2.07
VTNP04004 APOOP3-201ENST00000536787 586 ntBASIC2.1□□□□□ -2.07
VTNP04004 AC021231.3-201ENST00000558497 370 ntBASIC2.1□□□□□ -2.07
VTNP04004 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.1□□□□□ -2.07
VTNP04004 MIR3923-201ENST00000579521 83 ntBASIC2.1□□□□□ -2.07
VTNP04004 MIR3136-201ENST00000583498 78 ntBASIC2.1□□□□□ -2.07
VTNP04004 AC084781.2-201ENST00000615568 161 ntBASIC2.1□□□□□ -2.07
VTNP04004 AL669831.3-213ENST00000636676 183 ntBASIC2.1□□□□□ -2.07
VTNP04004 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
VTNP04004 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VTNP04004 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.09□□□□□ -2.07
VTNP04004 RNU6-784P-201ENST00000384330 106 ntBASIC2.09□□□□□ -2.07
VTNP04004 MIR95-201ENST00000385072 81 ntBASIC2.09□□□□□ -2.07
VTNP04004 MIR524-201ENST00000385242 87 ntBASIC2.09□□□□□ -2.07
VTNP04004 AL591034.2-201ENST00000402839 359 ntBASIC2.09□□□□□ -2.07
VTNP04004 RNU6-174P-201ENST00000410406 106 ntBASIC2.09□□□□□ -2.07
VTNP04004 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.09□□□□□ -2.07
VTNP04004 Y_RNA.632-201ENST00000459189 102 ntBASIC2.09□□□□□ -2.07
VTNP04004 AC145146.1-201ENST00000496370 254 ntBASIC2.09□□□□□ -2.07
VTNP04004 AC022447.4-201ENST00000504053 364 ntBASIC2.09□□□□□ -2.07
VTNP04004 FGF7P4-201ENST00000509595 295 ntBASIC2.09□□□□□ -2.07
VTNP04004 HMGB3P3-201ENST00000510526 400 ntBASIC2.09□□□□□ -2.07
VTNP04004 AC005741.1-201ENST00000511094 432 ntBASIC2.09□□□□□ -2.07
VTNP04004 RNA5SP384-201ENST00000516615 116 ntBASIC2.09□□□□□ -2.07
VTNP04004 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
VTNP04004 CBX3P8-201ENST00000532412 525 ntBASIC2.09□□□□□ -2.07
VTNP04004 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.09□□□□□ -2.07
VTNP04004 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.09□□□□□ -2.07
VTNP04004 AL078605.1-201ENST00000603529 500 ntBASIC2.09□□□□□ -2.07
VTNP04004 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.09□□□□□ -2.07
VTNP04004 Z98751.3-201ENST00000604447 521 ntBASIC2.09□□□□□ -2.07
VTNP04004 LARP7P1-201ENST00000605576 316 ntBASIC2.09□□□□□ -2.07
VTNP04004 AC008121.3-201ENST00000618726 433 ntBASIC2.09□□□□□ -2.07
VTNP04004 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.09□□□□□ -2.07
VTNP04004 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
VTNP04004 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
VTNP04004 AP000560.1-201ENST00000624150 1937 ntBASIC2.09□□□□□ -2.08
VTNP04004 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.08□□□□□ -2.08
VTNP04004 RNU6-1159P-201ENST00000362933 107 ntBASIC2.08□□□□□ -2.08
VTNP04004 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
VTNP04004 RNU6-1286P-201ENST00000383871 107 ntBASIC2.08□□□□□ -2.08
VTNP04004 RNU1-148P-201ENST00000384472 162 ntBASIC2.08□□□□□ -2.08
VTNP04004 RNA5SP213-201ENST00000391031 106 ntBASIC2.08□□□□□ -2.08
VTNP04004 RNU6-1093P-201ENST00000391194 107 ntBASIC2.08□□□□□ -2.08
VTNP04004 MIR208B-201ENST00000401172 77 ntBASIC2.08□□□□□ -2.08
VTNP04004 Y_RNA.597-201ENST00000410463 100 ntBASIC2.08□□□□□ -2.08
VTNP04004 EIF4EP2-201ENST00000422816 654 ntBASIC2.08□□□□□ -2.08
VTNP04004 AC012306.1-201ENST00000423267 114 ntBASIC2.08□□□□□ -2.08
VTNP04004 AL353997.1-201ENST00000432936 108 ntBASIC2.08□□□□□ -2.08
VTNP04004 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.08□□□□□ -2.08
VTNP04004 SCARNA16.2-201ENST00000516520 172 ntBASIC2.08□□□□□ -2.08
VTNP04004 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.08□□□□□ -2.08
VTNP04004 MYL12BP1-201ENST00000569826 507 ntBASIC2.08□□□□□ -2.08
VTNP04004 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.08□□□□□ -2.08
VTNP04004 7SK.7-201ENST00000603504 247 ntBASIC2.08□□□□□ -2.08
VTNP04004 AC245884.12-201ENST00000615364 59 ntBASIC2.08□□□□□ -2.08
VTNP04004 AL450472.1-202ENST00000637286 180 ntBASIC2.08□□□□□ -2.08
VTNP04004 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.07□□□□□ -2.08
VTNP04004 RNU4-15P-201ENST00000362613 141 ntBASIC2.07□□□□□ -2.08
VTNP04004 RNU1-23P-201ENST00000363361 144 ntBASIC2.07□□□□□ -2.08
VTNP04004 RNU6-1188P-201ENST00000363795 107 ntBASIC2.07□□□□□ -2.08
VTNP04004 RNU6-1274P-201ENST00000384557 107 ntBASIC2.07□□□□□ -2.08
VTNP04004 RNU6-310P-201ENST00000384655 107 ntBASIC2.07□□□□□ -2.08
VTNP04004 MIR144-201ENST00000384886 86 ntBASIC2.07□□□□□ -2.08
VTNP04004 SNORA12-201ENST00000391162 147 ntBASIC2.07□□□□□ -2.08
VTNP04004 Y_RNA.646-201ENST00000410980 101 ntBASIC2.07□□□□□ -2.08
VTNP04004 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.07□□□□□ -2.08
VTNP04004 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.07□□□□□ -2.08
VTNP04004 AC079354.2-201ENST00000453523 154 ntBASIC2.07□□□□□ -2.08
VTNP04004 Y_RNA.653-201ENST00000459091 95 ntBASIC2.07□□□□□ -2.08
VTNP04004 AC087477.1-201ENST00000465747 340 ntBASIC2.07□□□□□ -2.08
VTNP04004 RPL23AP75-201ENST00000491601 451 ntBASIC2.07□□□□□ -2.08
VTNP04004 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.07□□□□□ -2.08
VTNP04004 RNU6-567P-201ENST00000516746 107 ntBASIC2.07□□□□□ -2.08
VTNP04004 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
VTNP04004 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
VTNP04004 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.07□□□□□ -2.08
VTNP04004 AC104985.2-201ENST00000620598 500 ntBASIC2.07□□□□□ -2.08
VTNP04004 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.07□□□□□ -2.08
VTNP04004 MTND4P29-201ENST00000503122 1372 ntBASIC2.07□□□□□ -2.08
VTNP04004 AP006437.1-201ENST00000641440 3685 ntBASIC2.07□□□□□ -2.08
VTNP04004 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
VTNP04004 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VTNP04004 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
VTNP04004 RNU6-596P-201ENST00000365395 98 ntBASIC2.06□□□□□ -2.08
VTNP04004 RNU6-378P-201ENST00000384324 107 ntBASIC2.06□□□□□ -2.08
VTNP04004 SNORA51.11-201ENST00000384442 131 ntBASIC2.06□□□□□ -2.08
VTNP04004 MIR9-3-201ENST00000385084 90 ntBASIC2.06□□□□□ -2.08
VTNP04004 RNU2-41P-201ENST00000410991 178 ntBASIC2.06□□□□□ -2.08
VTNP04004 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.06□□□□□ -2.08
VTNP04004 MTCO2P27-201ENST00000420740 428 ntBASIC2.06□□□□□ -2.08
VTNP04004 USMG5P1-201ENST00000425964 177 ntBASIC2.06□□□□□ -2.08
VTNP04004 AC236972.2-201ENST00000434979 310 ntBASIC2.06□□□□□ -2.08
VTNP04004 Z82188.1-201ENST00000436709 154 ntBASIC2.06□□□□□ -2.08
VTNP04004 MTCO3P10-201ENST00000455912 772 ntBASIC2.06□□□□□ -2.08
VTNP04004 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
VTNP04004 AF186996.7-201ENST00000492781 209 ntBASIC2.06□□□□□ -2.08
VTNP04004 RPS29P11-201ENST00000496507 171 ntBASIC2.06□□□□□ -2.08
VTNP04004 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.06□□□□□ -2.08
VTNP04004 RNU6-120P-201ENST00000516077 103 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms