Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU6-1164P-201ENST00000364428 107 ntBASIC1.64□□□□□ -2.15
MMP1P03956 Y_RNA.295-201ENST00000364918 102 ntBASIC1.64□□□□□ -2.15
MMP1P03956 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
MMP1P03956 RNA5SP212-201ENST00000391223 107 ntBASIC1.64□□□□□ -2.15
MMP1P03956 BTF3L4P2-201ENST00000392798 346 ntBASIC1.64□□□□□ -2.15
MMP1P03956 RPS20P15-201ENST00000412792 311 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AC007098.1-201ENST00000420122 367 ntBASIC1.64□□□□□ -2.15
MMP1P03956 MTCO2P3-201ENST00000442543 421 ntBASIC1.64□□□□□ -2.15
MMP1P03956 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.64□□□□□ -2.15
MMP1P03956 AC092989.1-201ENST00000481235 277 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AC092436.3-201ENST00000511788 257 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AC087854.1-201ENST00000519706 414 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.64□□□□□ -2.15
MMP1P03956 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.64□□□□□ -2.15
MMP1P03956 AC025423.5-201ENST00000550230 219 ntBASIC1.64□□□□□ -2.15
MMP1P03956 VN1R107P-201ENST00000601784 209 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AC107304.1-201ENST00000604229 296 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AL157834.3-201ENST00000615543 103 ntBASIC1.64□□□□□ -2.15
MMP1P03956 AC090617.10-201ENST00000624308 134 ntBASIC1.64□□□□□ -2.15
MMP1P03956 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.63□□□□□ -2.15
MMP1P03956 MTND5P35-201ENST00000557537 1720 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MMP1P03956 Y_RNA.191-201ENST00000363972 113 ntBASIC1.63□□□□□ -2.15
MMP1P03956 RNU6-1329P-201ENST00000365664 107 ntBASIC1.63□□□□□ -2.15
MMP1P03956 RNU6-43P-201ENST00000384302 107 ntBASIC1.63□□□□□ -2.15
MMP1P03956 RNY1P14-201ENST00000384426 108 ntBASIC1.63□□□□□ -2.15
MMP1P03956 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
MMP1P03956 RNU11-3P-201ENST00000391111 133 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AL356432.1-201ENST00000405809 419 ntBASIC1.63□□□□□ -2.15
MMP1P03956 Y_RNA.619-201ENST00000410951 90 ntBASIC1.63□□□□□ -2.15
MMP1P03956 FCF1P9-201ENST00000412546 282 ntBASIC1.63□□□□□ -2.15
MMP1P03956 EIF4EP2-201ENST00000422816 654 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AL590556.1-201ENST00000423231 483 ntBASIC1.63□□□□□ -2.15
MMP1P03956 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP1P03956 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP1P03956 AL359672.1-201ENST00000442302 409 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AK3P2-201ENST00000507976 429 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP1P03956 FAM206BP-201ENST00000510179 541 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AC091874.1-201ENST00000511402 339 ntBASIC1.63□□□□□ -2.15
MMP1P03956 RNU5F-2P-201ENST00000516066 82 ntBASIC1.63□□□□□ -2.15
MMP1P03956 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP1P03956 AC104576.1-201ENST00000524225 88 ntBASIC1.63□□□□□ -2.15
MMP1P03956 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP1P03956 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.63□□□□□ -2.15
MMP1P03956 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.63□□□□□ -2.15
MMP1P03956 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.63□□□□□ -2.15
MMP1P03956 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.63□□□□□ -2.15
MMP1P03956 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
MMP1P03956 AC063943.3-201ENST00000615562 356 ntBASIC1.63□□□□□ -2.15
MMP1P03956 AC007014.2-201ENST00000615581 479 ntBASIC1.63□□□□□ -2.15
MMP1P03956 RNU1-58P-201ENST00000362413 163 ntBASIC1.62□□□□□ -2.15
MMP1P03956 Y_RNA.99-201ENST00000363138 105 ntBASIC1.62□□□□□ -2.15
MMP1P03956 Y_RNA.373-201ENST00000365600 103 ntBASIC1.62□□□□□ -2.15
MMP1P03956 Y_RNA.453-201ENST00000384223 109 ntBASIC1.62□□□□□ -2.15
MMP1P03956 RNU6-1245P-201ENST00000411130 106 ntBASIC1.62□□□□□ -2.15
MMP1P03956 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
MMP1P03956 EIF1P1-201ENST00000421436 341 ntBASIC1.62□□□□□ -2.15
MMP1P03956 RPL23AP95-201ENST00000426806 265 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.62□□□□□ -2.15
MMP1P03956 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.62□□□□□ -2.15
MMP1P03956 RPS29P27-201ENST00000463711 170 ntBASIC1.62□□□□□ -2.15
MMP1P03956 HMGN1P7-201ENST00000491722 313 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AC069439.1-201ENST00000494739 167 ntBASIC1.62□□□□□ -2.15
MMP1P03956 RNA5SP102-201ENST00000516865 106 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AP003033.1-201ENST00000527244 415 ntBASIC1.62□□□□□ -2.15
MMP1P03956 TRAV32-201ENST00000553993 340 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.62□□□□□ -2.15
MMP1P03956 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AP003465.2-201ENST00000602571 373 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AP001836.1-201ENST00000604675 523 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AC018889.1-201ENST00000605372 397 ntBASIC1.62□□□□□ -2.15
MMP1P03956 MIR1248-201ENST00000629190 106 ntBASIC1.62□□□□□ -2.15
MMP1P03956 SNORA43.4-201ENST00000629559 138 ntBASIC1.62□□□□□ -2.15
MMP1P03956 AL450472.1-202ENST00000637286 180 ntBASIC1.62□□□□□ -2.15
MMP1P03956 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
MMP1P03956 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
MMP1P03956 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
MMP1P03956 RNU6-1252P-201ENST00000363054 104 ntBASIC1.61□□□□□ -2.15
MMP1P03956 RNU6-743P-201ENST00000364151 106 ntBASIC1.61□□□□□ -2.15
MMP1P03956 RNU6-877P-201ENST00000383868 107 ntBASIC1.61□□□□□ -2.15
MMP1P03956 MIR597-201ENST00000384968 97 ntBASIC1.61□□□□□ -2.15
MMP1P03956 MIR450B-201ENST00000401182 78 ntBASIC1.61□□□□□ -2.15
MMP1P03956 UBE2V1P4-201ENST00000425374 344 ntBASIC1.61□□□□□ -2.15
MMP1P03956 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
MMP1P03956 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.61□□□□□ -2.15
MMP1P03956 FGF7P6-202ENST00000451282 293 ntBASIC1.61□□□□□ -2.15
MMP1P03956 AC022447.4-201ENST00000504053 364 ntBASIC1.61□□□□□ -2.15
MMP1P03956 AC093259.1-201ENST00000509755 300 ntBASIC1.61□□□□□ -2.15
MMP1P03956 RNU6-1332P-201ENST00000516666 104 ntBASIC1.61□□□□□ -2.15
MMP1P03956 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.61□□□□□ -2.15
MMP1P03956 AP000907.4-201ENST00000604143 237 ntBASIC1.61□□□□□ -2.15
MMP1P03956 AC122108.2-201ENST00000611946 526 ntBASIC1.61□□□□□ -2.15
MMP1P03956 AC084782.3-201ENST00000612282 578 ntBASIC1.61□□□□□ -2.15
MMP1P03956 U1.36-201ENST00000620684 176 ntBASIC1.61□□□□□ -2.15
MMP1P03956 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.61□□□□□ -2.15
MMP1P03956 MIR3662-201ENST00000637030 95 ntBASIC1.61□□□□□ -2.15
MMP1P03956 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms