Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
MT-ND4P03905 RNU5B-2P-201ENST00000363036 113 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 SNORA63D-201ENST00000364359 132 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 RNU6-1019P-201ENST00000364424 107 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 RNU6-1317P-201ENST00000364582 104 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 SNORD1A-201ENST00000364968 72 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 Y_RNA.378-201ENST00000365652 113 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 RNU6-38P-201ENST00000384085 107 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 RNA5SP213-201ENST00000391031 106 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 RNU2-7P-201ENST00000410794 178 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.07□□□□□ -2.24
MT-ND4P03905 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.07□□□□□ -2.24
MT-ND4P03905 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.07□□□□□ -2.24
MT-ND4P03905 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.07□□□□□ -2.24
MT-ND4P03905 RPS26P55-201ENST00000471178 356 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 RPL36AP21-201ENST00000490372 323 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 AC091133.4-201ENST00000511142 308 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 AC067942.3-201ENST00000512025 362 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 RNA5SP384-201ENST00000516615 116 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 MRPS36P4-201ENST00000534436 298 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 AC016256.1-201ENST00000547971 354 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.07□□□□□ -2.24
MT-ND4P03905 AC092747.3-201ENST00000603769 301 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 AL121757.2-201ENST00000611223 313 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 AC126177.8-201ENST00000618339 1015 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 AC009509.4-201ENST00000619202 509 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.07□□□□□ -2.24
MT-ND4P03905 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
MT-ND4P03905 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
MT-ND4P03905 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
MT-ND4P03905 RNU6-82P-201ENST00000363970 107 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 Y_RNA.359-201ENST00000365498 102 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 RNU6-1329P-201ENST00000365664 107 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 MIR549A-201ENST00000385268 96 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 SNORD37.1-201ENST00000390968 65 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 MIR1283-1-201ENST00000408494 87 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 RNU4-55P-201ENST00000410731 137 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 EBAG9P1-201ENST00000418955 543 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.06□□□□□ -2.24
MT-ND4P03905 AC011406.1-201ENST00000512440 370 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.06□□□□□ -2.24
MT-ND4P03905 RNA5SP401-201ENST00000515920 127 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 RNU1-92P-201ENST00000517017 135 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.06□□□□□ -2.24
MT-ND4P03905 AC087854.1-201ENST00000519706 414 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.06□□□□□ -2.24
MT-ND4P03905 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.06□□□□□ -2.24
MT-ND4P03905 MIR5692C1-201ENST00000585309 91 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 AL357078.3-201ENST00000607528 618 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 AC005562.2-201ENST00000618264 111 ntBASIC1.06□□□□□ -2.24
MT-ND4P03905 BX322639.1-202ENST00000423987 2213 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 ELL2P3-201ENST00000457883 1602 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 Y_RNA.123-201ENST00000363338 102 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 RNU4-66P-201ENST00000365199 138 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 RNU4-20P-201ENST00000365601 151 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 U8.10-201ENST00000384260 133 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 MIR300-201ENST00000401138 83 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 RNA5SP494-201ENST00000410653 129 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AC004866.1-201ENST00000411748 78 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 CDK8P2-201ENST00000415020 547 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.05□□□□□ -2.24
MT-ND4P03905 RPS27P16-201ENST00000425758 201 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.05□□□□□ -2.24
MT-ND4P03905 AC004386.2-201ENST00000441858 148 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AC016717.1-201ENST00000448918 286 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 OR2AQ1P-201ENST00000451972 200 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 TPT1P7-201ENST00000458300 517 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AC010424.1-201ENST00000506336 297 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.05□□□□□ -2.24
MT-ND4P03905 SCOCP1-201ENST00000554676 349 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 DNAJC19P9-201ENST00000555084 351 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AC006362.1-201ENST00000567392 174 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 RMST_3.1-201ENST00000611651 109 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AL121890.5-201ENST00000620848 304 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 AC139792.3-201ENST00000623525 224 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 FER-210ENST00000628534 558 ntTSL 5 BASIC1.05□□□□□ -2.24
MT-ND4P03905 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.05□□□□□ -2.24
MT-ND4P03905 MIR338-201ENST00000636369 67 ntBASIC1.05□□□□□ -2.24
MT-ND4P03905 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
MT-ND4P03905 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
MT-ND4P03905 RNU6-1286P-201ENST00000383871 107 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 Y_RNA.409-201ENST00000383990 98 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 RNY3P9-201ENST00000384727 106 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 MIR764-201ENST00000390811 85 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 Y_RNA.582-201ENST00000391023 95 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 SNORA40.6-201ENST00000391153 128 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 SNORA17.3-201ENST00000391159 129 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
MT-ND4P03905 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.04□□□□□ -2.24
MT-ND4P03905 TIMM9P3-201ENST00000428659 274 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 MTCO3P29-201ENST00000432119 779 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 FTH1P12-201ENST00000432137 551 ntBASIC1.04□□□□□ -2.24
MT-ND4P03905 AL135790.2-201ENST00000437701 267 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms