Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.52□□□□□ -2.33
APOEP02649 EXOSC3P1-201ENST00000448649 500 ntBASIC0.52□□□□□ -2.33
APOEP02649 AC104136.1-201ENST00000512969 394 ntBASIC0.52□□□□□ -2.33
APOEP02649 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
APOEP02649 RNA5SP255-201ENST00000516370 107 ntBASIC0.52□□□□□ -2.33
APOEP02649 RNU2-34P-201ENST00000516534 121 ntBASIC0.52□□□□□ -2.33
APOEP02649 MIR4753-201ENST00000585119 83 ntBASIC0.52□□□□□ -2.33
APOEP02649 AC080078.2-201ENST00000603766 501 ntBASIC0.52□□□□□ -2.33
APOEP02649 AL513534.2-201ENST00000603836 250 ntBASIC0.52□□□□□ -2.33
APOEP02649 AL356157.2-201ENST00000605122 111 ntBASIC0.52□□□□□ -2.33
APOEP02649 AC104458.1-201ENST00000608243 463 ntBASIC0.52□□□□□ -2.33
APOEP02649 AL031667.3-201ENST00000620124 655 ntBASIC0.52□□□□□ -2.33
APOEP02649 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.52□□□□□ -2.33
APOEP02649 SNORA43.4-201ENST00000629559 138 ntBASIC0.52□□□□□ -2.33
APOEP02649 AL391994.1-201ENST00000254724 282 ntBASIC0.51□□□□□ -2.33
APOEP02649 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
APOEP02649 Y_RNA.18-201ENST00000362461 102 ntBASIC0.51□□□□□ -2.33
APOEP02649 Y_RNA.287-201ENST00000364853 94 ntBASIC0.51□□□□□ -2.33
APOEP02649 RNU6-715P-201ENST00000365204 103 ntBASIC0.51□□□□□ -2.33
APOEP02649 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
APOEP02649 MIR300-201ENST00000401138 83 ntBASIC0.51□□□□□ -2.33
APOEP02649 AL117339.3-201ENST00000418733 162 ntBASIC0.51□□□□□ -2.33
APOEP02649 MTCO3P18-201ENST00000440206 761 ntBASIC0.51□□□□□ -2.33
APOEP02649 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.51□□□□□ -2.33
APOEP02649 AC008628.2-201ENST00000502605 298 ntBASIC0.51□□□□□ -2.33
APOEP02649 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.51□□□□□ -2.33
APOEP02649 AC116562.3-201ENST00000506136 177 ntBASIC0.51□□□□□ -2.33
APOEP02649 MTCO3P7-201ENST00000510008 774 ntBASIC0.51□□□□□ -2.33
APOEP02649 RNU6-947P-201ENST00000516264 106 ntBASIC0.51□□□□□ -2.33
APOEP02649 RNU6-1069P-201ENST00000516612 133 ntBASIC0.51□□□□□ -2.33
APOEP02649 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
APOEP02649 RNU6-1178P-201ENST00000516674 107 ntBASIC0.51□□□□□ -2.33
APOEP02649 RNU6-567P-201ENST00000516746 107 ntBASIC0.51□□□□□ -2.33
APOEP02649 AC068587.5-201ENST00000528506 175 ntBASIC0.51□□□□□ -2.33
APOEP02649 AC103996.1-201ENST00000555468 102 ntBASIC0.51□□□□□ -2.33
APOEP02649 AL390123.1-201ENST00000603216 237 ntBASIC0.51□□□□□ -2.33
APOEP02649 GHRLOS.1-201ENST00000610995 70 ntBASIC0.51□□□□□ -2.33
APOEP02649 AC006001.4-201ENST00000622243 395 ntBASIC0.51□□□□□ -2.33
APOEP02649 SNORD3E-202ENST00000627253 216 ntBASIC0.51□□□□□ -2.33
APOEP02649 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
APOEP02649 RNU6-562P-201ENST00000362731 107 ntBASIC0.5□□□□□ -2.33
APOEP02649 RNU6-1093P-201ENST00000391194 107 ntBASIC0.5□□□□□ -2.33
APOEP02649 Y_RNA.608-201ENST00000410647 95 ntBASIC0.5□□□□□ -2.33
APOEP02649 RNU2-8P-201ENST00000410727 190 ntBASIC0.5□□□□□ -2.33
APOEP02649 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.5□□□□□ -2.33
APOEP02649 AC090960.1-201ENST00000421072 306 ntBASIC0.5□□□□□ -2.33
APOEP02649 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
APOEP02649 MTCYBP1-201ENST00000454315 1119 ntBASIC0.5□□□□□ -2.33
APOEP02649 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.5□□□□□ -2.33
APOEP02649 RNU6-948P-201ENST00000516374 107 ntBASIC0.5□□□□□ -2.33
APOEP02649 AC022616.3-201ENST00000523940 148 ntBASIC0.5□□□□□ -2.33
APOEP02649 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.5□□□□□ -2.33
APOEP02649 AC091489.2-201ENST00000566263 604 ntBASIC0.5□□□□□ -2.33
APOEP02649 AL353765.1-201ENST00000605514 183 ntBASIC0.5□□□□□ -2.33
APOEP02649 AC064807.4-201ENST00000607201 407 ntBASIC0.5□□□□□ -2.33
APOEP02649 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
APOEP02649 RNY1-201ENST00000364228 113 ntBASIC0.49□□□□□ -2.33
APOEP02649 SNORA80D-201ENST00000384488 135 ntBASIC0.49□□□□□ -2.33
APOEP02649 RNU6-83P-201ENST00000384568 112 ntBASIC0.49□□□□□ -2.33
APOEP02649 RNU6-950P-201ENST00000384651 107 ntBASIC0.49□□□□□ -2.33
APOEP02649 RNU6-550P-201ENST00000391057 101 ntBASIC0.49□□□□□ -2.33
APOEP02649 RNA5SP323-201ENST00000391094 133 ntBASIC0.49□□□□□ -2.33
APOEP02649 AC012306.1-201ENST00000423267 114 ntBASIC0.49□□□□□ -2.33
APOEP02649 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
APOEP02649 AL445305.1-201ENST00000432577 575 ntBASIC0.49□□□□□ -2.33
APOEP02649 AL031274.1-201ENST00000450334 232 ntBASIC0.49□□□□□ -2.33
APOEP02649 AC010486.2-201ENST00000505572 483 ntBASIC0.49□□□□□ -2.33
APOEP02649 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.49□□□□□ -2.33
APOEP02649 LRRC34P2-201ENST00000514850 553 ntBASIC0.49□□□□□ -2.33
APOEP02649 RNA5SP436-201ENST00000516020 115 ntBASIC0.49□□□□□ -2.33
APOEP02649 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
APOEP02649 SCARNA24.1-201ENST00000516465 137 ntBASIC0.49□□□□□ -2.33
APOEP02649 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
APOEP02649 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.49□□□□□ -2.33
APOEP02649 Z99497.2-201ENST00000603634 310 ntBASIC0.49□□□□□ -2.33
APOEP02649 AC022217.4-201ENST00000604389 163 ntBASIC0.49□□□□□ -2.33
APOEP02649 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.49□□□□□ -2.33
APOEP02649 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
APOEP02649 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
APOEP02649 MIR549A-201ENST00000385268 96 ntBASIC0.48□□□□□ -2.33
APOEP02649 SNORD41-201ENST00000386967 70 ntBASIC0.48□□□□□ -2.33
APOEP02649 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.48□□□□□ -2.33
APOEP02649 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.48□□□□□ -2.33
APOEP02649 AL035398.1-201ENST00000430869 322 ntBASIC0.48□□□□□ -2.33
APOEP02649 AK3P2-201ENST00000507976 429 ntBASIC0.48□□□□□ -2.33
APOEP02649 AC024995.1-201ENST00000523014 93 ntBASIC0.48□□□□□ -2.33
APOEP02649 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.48□□□□□ -2.33
APOEP02649 AL359999.1-201ENST00000604513 294 ntBASIC0.48□□□□□ -2.33
APOEP02649 AC009229.3-201ENST00000608056 282 ntBASIC0.48□□□□□ -2.33
APOEP02649 AL157392.4-201ENST00000609756 345 ntBASIC0.48□□□□□ -2.33
APOEP02649 AC116165.2-201ENST00000616705 206 ntBASIC0.48□□□□□ -2.33
APOEP02649 AL078595.3-201ENST00000623815 1166 ntBASIC0.48□□□□□ -2.33
APOEP02649 RNU6-827P-201ENST00000365553 106 ntBASIC0.47□□□□□ -2.33
APOEP02649 RNU6-975P-201ENST00000384296 105 ntBASIC0.47□□□□□ -2.33
APOEP02649 MIR598-201ENST00000384868 97 ntBASIC0.47□□□□□ -2.33
APOEP02649 SNORA12.1-201ENST00000390873 148 ntBASIC0.47□□□□□ -2.33
APOEP02649 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
APOEP02649 AL355796.1-201ENST00000406706 323 ntBASIC0.47□□□□□ -2.33
APOEP02649 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.47□□□□□ -2.33
APOEP02649 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms