Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 SNORD56-201ENST00000413522 71 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 AC096920.1-201ENST00000423991 241 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 Z82205.1-201ENST00000428456 297 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 USP9YP30-201ENST00000430729 455 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 DAP3P1-201ENST00000441522 278 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.86□□□□□ -2.11
KRT6AP02538 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT6AP02538 RNU6-1037P-201ENST00000459571 107 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.86□□□□□ -2.11
KRT6AP02538 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.86□□□□□ -2.11
KRT6AP02538 RNU6-976P-201ENST00000516086 111 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 RNU6-307P-201ENST00000516743 106 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 Y_RNA.711-201ENST00000516993 102 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 SNORA31.23-201ENST00000517219 133 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 AC011494.1-201ENST00000596454 237 ntBASIC1.86□□□□□ -2.11
KRT6AP02538 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.86□□□□□ -2.11
KRT6AP02538 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRT6AP02538 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
KRT6AP02538 Y_RNA.112-201ENST00000363250 102 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 Y_RNA.132-201ENST00000363421 102 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 RNU6-596P-201ENST00000365395 98 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 RNU6-1040P-201ENST00000383974 107 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 Y_RNA.404-201ENST00000383978 102 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 Y_RNA.422-201ENST00000384054 114 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 RNU6-890P-201ENST00000384121 107 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 RNU6-933P-201ENST00000384424 107 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KRT6AP02538 SNORA75.6-201ENST00000391318 127 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 SNORA3.2-201ENST00000408221 125 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 RNU6-325P-201ENST00000411132 105 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 USMG5P1-201ENST00000425964 177 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT6AP02538 RPS15AP10-201ENST00000432472 382 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AL137792.2-201ENST00000443484 235 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 MTND4P19-201ENST00000446659 478 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AL031274.1-201ENST00000450334 232 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 MED28P2-201ENST00000475771 317 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 RPL7P42-201ENST00000481005 679 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AL163540.1-201ENST00000485382 386 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 HSPE1P18-201ENST00000517602 280 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
KRT6AP02538 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT6AP02538 TRAV32-201ENST00000553993 340 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AC005899.2-201ENST00000584353 90 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AL109918.3-201ENST00000603072 338 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT6AP02538 MIR6852-201ENST00000621699 66 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 uc_338.22-201ENST00000622722 187 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AC090517.3-201ENST00000625170 141 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 SCARNA4-202ENST00000625402 129 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 AC092881.1-201ENST00000638218 2733 ntBASIC1.85□□□□□ -2.11
KRT6AP02538 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 Y_RNA.2-201ENST00000362330 96 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 SNORD115-3-201ENST00000363100 82 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 RNU5E-7P-201ENST00000365290 117 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 RNU6-827P-201ENST00000365553 106 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 RNU6-72P-201ENST00000384285 79 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 Y_RNA.473-201ENST00000384333 102 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 RNU6-790P-201ENST00000384479 105 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 AL117339.3-201ENST00000418733 162 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 AL133396.1-201ENST00000432048 687 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRT6AP02538 FTH1P25-201ENST00000447665 469 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 AL137159.1-201ENST00000452808 512 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.84□□□□□ -2.11
KRT6AP02538 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.84□□□□□ -2.11
KRT6AP02538 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRT6AP02538 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.84□□□□□ -2.11
KRT6AP02538 CPDP1-201ENST00000579660 283 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 AC006504.6-201ENST00000590142 199 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 AL670379.2-201ENST00000604983 252 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 AC018889.1-201ENST00000605372 397 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.84□□□□□ -2.11
KRT6AP02538 AC097372.5-201ENST00000623665 376 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 MIR3529-201ENST00000637713 78 ntBASIC1.84□□□□□ -2.11
KRT6AP02538 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.84□□□□□ -2.12
KRT6AP02538 RBBP8P1-201ENST00000449447 1844 ntBASIC1.84□□□□□ -2.12
KRT6AP02538 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
KRT6AP02538 RNU6-1115P-201ENST00000362490 106 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 Y_RNA.28-201ENST00000362554 111 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 RNU6-1059P-201ENST00000363752 98 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 SNORA33.2-201ENST00000365413 134 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 RNU6-842P-201ENST00000384269 107 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 RN7SKP192-201ENST00000411291 327 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 AL158823.1-201ENST00000418441 478 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 PMCHL1-202ENST00000423102 261 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.83□□□□□ -2.12
KRT6AP02538 AC013470.1-201ENST00000453438 462 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 AC006026.2-201ENST00000457376 180 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 MIR2053-201ENST00000459295 91 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 U8.21-201ENST00000459536 136 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 RPL9P9-202ENST00000466501 579 ntBASIC1.83□□□□□ -2.12
KRT6AP02538 PTP4A1P4-201ENST00000512479 322 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms