Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 Y_RNA.672-201ENST00000516289 104 ntBASIC0.55□□□□□ -2.32
HLA-DRAP01903 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.55□□□□□ -2.32
HLA-DRAP01903 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.55□□□□□ -2.32
HLA-DRAP01903 GHRLOS.1-201ENST00000610995 70 ntBASIC0.55□□□□□ -2.32
HLA-DRAP01903 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HLA-DRAP01903 AL391994.1-201ENST00000254724 282 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 RNU5F-6P-201ENST00000362979 116 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 Y_RNA.122-201ENST00000363331 96 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 SNORA20.2-201ENST00000383922 131 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 RNU6-906P-201ENST00000384700 70 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 RNU6-1093P-201ENST00000391194 107 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 RN7SKP200-201ENST00000410564 320 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.54□□□□□ -2.32
HLA-DRAP01903 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC245047.7-201ENST00000440265 293 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC074290.1-201ENST00000448883 135 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC010486.2-201ENST00000505572 483 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC105758.1-201ENST00000506038 399 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 MTCO3P7-201ENST00000510008 774 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AL590705.4-201ENST00000532209 134 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC022432.1-201ENST00000595739 310 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AP001836.1-201ENST00000604675 523 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.54□□□□□ -2.32
HLA-DRAP01903 RMST_2.1-201ENST00000617263 136 ntBASIC0.54□□□□□ -2.32
HLA-DRAP01903 SNORA33-201ENST00000363664 130 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 RNU1-133P-201ENST00000364867 167 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 RNU6-975P-201ENST00000384296 105 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 RNA5SP109-201ENST00000391010 116 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 MIR942-201ENST00000401111 86 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 MIR1253-201ENST00000408273 105 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.53□□□□□ -2.32
HLA-DRAP01903 NDUFA5P4-201ENST00000436704 385 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.53□□□□□ -2.32
HLA-DRAP01903 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.53□□□□□ -2.32
HLA-DRAP01903 AL031274.1-201ENST00000450334 232 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 AC092991.1-201ENST00000477176 376 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 LRRC34P2-201ENST00000514850 553 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.53□□□□□ -2.32
HLA-DRAP01903 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 TPRKBP2-201ENST00000565969 475 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 AL391840.1-201ENST00000571144 367 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 MIR4999-201ENST00000585029 91 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.53□□□□□ -2.32
HLA-DRAP01903 SNORD3E-202ENST00000627253 216 ntBASIC0.53□□□□□ -2.32
HLA-DRAP01903 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
HLA-DRAP01903 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HLA-DRAP01903 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
HLA-DRAP01903 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 SNORA80D-201ENST00000384488 135 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 RNU6-110P-201ENST00000384508 104 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 RNU6-417P-201ENST00000384712 107 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 CDK8P2-201ENST00000415020 547 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.52□□□□□ -2.33
HLA-DRAP01903 MTCO2P23-201ENST00000425216 680 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 AL365184.2-201ENST00000431139 435 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 BET1P1-201ENST00000482276 359 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 SCARNA24.1-201ENST00000516465 137 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 AC026470.2-201ENST00000561492 181 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DRAP01903 AC018714.1-201ENST00000605028 208 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 AC005562.2-201ENST00000618264 111 ntBASIC0.52□□□□□ -2.33
HLA-DRAP01903 RNU6-1303P-201ENST00000364841 107 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 SNORA36A-201ENST00000384221 132 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRAP01903 AL133217.1-201ENST00000450980 425 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AL162395.1-201ENST00000457882 422 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 COX6CP6-201ENST00000490840 228 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC091874.1-201ENST00000511402 339 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 RNU6-922P-201ENST00000516753 99 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC007834.2-201ENST00000536310 343 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC103996.1-201ENST00000555468 102 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRAP01903 AL158050.2-201ENST00000605336 568 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC104458.1-201ENST00000608243 463 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC104465.1-201ENST00000611365 139 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC009159.2-201ENST00000617603 606 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC011155.2-201ENST00000623202 216 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC022418.1-201ENST00000624118 445 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AC006927.3-201ENST00000638789 384 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
HLA-DRAP01903 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
HLA-DRAP01903 RNA5SP361-201ENST00000362686 118 ntBASIC0.5□□□□□ -2.33
HLA-DRAP01903 RNU6-827P-201ENST00000365553 106 ntBASIC0.5□□□□□ -2.33
HLA-DRAP01903 RNU6-505P-201ENST00000384427 107 ntBASIC0.5□□□□□ -2.33
HLA-DRAP01903 AC010154.1-201ENST00000425857 269 ntBASIC0.5□□□□□ -2.33
HLA-DRAP01903 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.5□□□□□ -2.33
HLA-DRAP01903 AC079382.1-201ENST00000493346 557 ntBASIC0.5□□□□□ -2.33
HLA-DRAP01903 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms