Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RNU6-975P-201ENST00000384296 105 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 SNORD116-12-201ENST00000384468 92 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 RNU6-1067P-201ENST00000384752 107 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 SNORA12.1-201ENST00000390873 148 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 RNA5SP222-201ENST00000411039 105 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC090960.1-201ENST00000421072 306 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC245047.3-201ENST00000429428 127 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.1□□□□□ -2.39
IFNA1P01562 RPS20P10-201ENST00000451209 253 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.1□□□□□ -2.39
IFNA1P01562 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.1□□□□□ -2.39
IFNA1P01562 AC087854.1-201ENST00000519706 414 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC106038.2-201ENST00000520706 568 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC027419.1-201ENST00000522976 328 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC016256.1-201ENST00000547971 354 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC011195.1-201ENST00000578177 177 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 MIR4452-201ENST00000583004 71 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.1□□□□□ -2.39
IFNA1P01562 Z99497.2-201ENST00000603634 310 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 AC092354.1-201ENST00000606057 376 ntBASIC0.1□□□□□ -2.39
IFNA1P01562 SNORA63.3-201ENST00000362682 132 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 RNU6-428P-201ENST00000362942 107 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 RNU6-45P-201ENST00000384471 107 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 MIR549A-201ENST00000385268 96 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.09□□□□□ -2.4
IFNA1P01562 SNAP23P1-201ENST00000433229 246 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 AC117522.1-201ENST00000509821 380 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 AC025465.4-201ENST00000513422 638 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 RNU6-237P-201ENST00000515985 71 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 RNU6-917P-201ENST00000516294 104 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 RNU6-1110P-201ENST00000516462 101 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 AC022616.6-201ENST00000520479 119 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.09□□□□□ -2.4
IFNA1P01562 DEFB131C-201ENST00000528817 165 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 MTND1P15-201ENST00000579262 949 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 RAC1P9-201ENST00000604990 392 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 AP000484.1-201ENST00000620067 1252 ntBASIC0.09□□□□□ -2.4
IFNA1P01562 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.09□□□□□ -2.4
IFNA1P01562 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.09□□□□□ -2.4
IFNA1P01562 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
IFNA1P01562 SNORA2.2-201ENST00000365473 135 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 Y_RNA.504-201ENST00000384481 104 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 RNU6-342P-201ENST00000384521 104 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 MRPL42P3-201ENST00000401492 326 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 RPL23AP50-201ENST00000434149 455 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.08□□□□□ -2.4
IFNA1P01562 AC079382.1-201ENST00000493346 557 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 RNA5SP337-201ENST00000517007 109 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 RNU6-1223P-201ENST00000517124 104 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
IFNA1P01562 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
IFNA1P01562 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.08□□□□□ -2.4
IFNA1P01562 AL162424.1-201ENST00000602325 221 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 RNU6-1192P-201ENST00000612197 107 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 AL359075.3-201ENST00000613288 217 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 AC008250.2-201ENST00000615261 205 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 RNU6-489P-201ENST00000618289 107 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 U6.108-201ENST00000637764 58 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 AC100810.6-201ENST00000638068 285 ntBASIC0.08□□□□□ -2.4
IFNA1P01562 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
IFNA1P01562 Y_RNA.324-201ENST00000365165 102 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
IFNA1P01562 RNA5SP247-201ENST00000411181 105 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.07□□□□□ -2.4
IFNA1P01562 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.07□□□□□ -2.4
IFNA1P01562 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.07□□□□□ -2.4
IFNA1P01562 SNRPGP9-201ENST00000456025 225 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.07□□□□□ -2.4
IFNA1P01562 AC008628.2-201ENST00000502605 298 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AC010486.2-201ENST00000505572 483 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.07□□□□□ -2.4
IFNA1P01562 SNORA62.5-201ENST00000516634 120 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AC023050.3-201ENST00000541142 333 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.07□□□□□ -2.4
IFNA1P01562 MIR4711-201ENST00000578274 70 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AC112187.2-201ENST00000604345 283 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.07□□□□□ -2.4
IFNA1P01562 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.07□□□□□ -2.4
IFNA1P01562 AL391903.3-201ENST00000612158 163 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 AP000943.4-201ENST00000622912 357 ntBASIC0.07□□□□□ -2.4
IFNA1P01562 SNORA36A-201ENST00000384221 132 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 RPS29P13-201ENST00000402041 169 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 RNU2-39P-201ENST00000410604 198 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 AC137499.1-201ENST00000427602 88 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.06□□□□□ -2.4
IFNA1P01562 AL603825.1-201ENST00000438481 80 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 BTBD7P2-201ENST00000441962 620 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
IFNA1P01562 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.06□□□□□ -2.4
IFNA1P01562 AC013470.1-201ENST00000453438 462 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 LINC01399-202ENST00000458450 244 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 AC131055.1-201ENST00000584626 316 ntBASIC0.06□□□□□ -2.4
IFNA1P01562 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.06□□□□□ -2.4
IFNA1P01562 AP000568.1-201ENST00000282964 442 ntBASIC0.05□□□□□ -2.4
IFNA1P01562 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
IFNA1P01562 Y_RNA.224-201ENST00000364308 111 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms