Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PDGFBP01127 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PDGFBP01127 RNU6-1285P-201ENST00000363480 105 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 SNORA8-201ENST00000384574 139 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 RNU6-95P-201ENST00000384697 107 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 MIR549A-201ENST00000385268 96 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PDGFBP01127 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 MIR1262-201ENST00000408276 93 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 EIF4EP2-201ENST00000422816 654 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 USP9YP28-201ENST00000435142 589 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.92□□□□□ -2.1
PDGFBP01127 RNU7-66P-201ENST00000459469 62 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 U8.21-201ENST00000459536 136 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.92□□□□□ -2.1
PDGFBP01127 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.92□□□□□ -2.1
PDGFBP01127 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 RNU6-1088P-201ENST00000516850 104 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.92□□□□□ -2.1
PDGFBP01127 MRPS36P4-201ENST00000534436 298 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AC109446.1-201ENST00000566172 220 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.92□□□□□ -2.1
PDGFBP01127 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AL078605.1-201ENST00000603529 500 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AL034555.1-201ENST00000604816 211 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AL356157.2-201ENST00000605122 111 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 AC009248.2-201ENST00000619826 254 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 CASC19-280ENST00000642102 1351 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.92□□□□□ -2.1
PDGFBP01127 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PDGFBP01127 ZNF720P1-201ENST00000562403 1939 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PDGFBP01127 RNU1-58P-201ENST00000362413 163 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 RNU4-15P-201ENST00000362613 141 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 RNU6-227P-201ENST00000362865 103 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 Y_RNA.212-201ENST00000364177 102 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 RNU6-1141P-201ENST00000364520 107 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 MIR1294-201ENST00000408503 142 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 AL358453.1-201ENST00000422522 250 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 UBE2V1P4-201ENST00000425374 344 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.91□□□□□ -2.1
PDGFBP01127 PCMTD1P1-201ENST00000455560 355 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 AC130509.1-201ENST00000464158 433 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 RPS29P25-201ENST00000481709 171 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 Y_RNA.682-201ENST00000516457 100 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 AF235103.2-201ENST00000525753 346 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.91□□□□□ -2.1
PDGFBP01127 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.91□□□□□ -2.1
PDGFBP01127 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
PDGFBP01127 AL022345.1-201ENST00000607292 135 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 AL138726.1-201ENST00000614873 333 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 AC006504.8-201ENST00000621046 635 ntBASIC1.91□□□□□ -2.1
PDGFBP01127 Y_RNA.157-201ENST00000363638 102 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 Y_RNA.160-201ENST00000363677 92 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 RNU4-56P-201ENST00000364700 142 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 Y_RNA.473-201ENST00000384333 102 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 RNU11-3P-201ENST00000391111 133 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AL356776.1-201ENST00000406574 447 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PDGFBP01127 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.9□□□□□ -2.11
PDGFBP01127 MTND1P11-201ENST00000456661 876 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.9□□□□□ -2.11
PDGFBP01127 MTCO1P29-201ENST00000496868 288 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.9□□□□□ -2.11
PDGFBP01127 AC016632.1-201ENST00000503994 196 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC021146.2-201ENST00000504736 556 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
PDGFBP01127 RNA5SP480-201ENST00000516840 109 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC087441.2-201ENST00000529141 262 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.9□□□□□ -2.11
PDGFBP01127 SCOCP1-201ENST00000554676 349 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 SNORA59B-202ENST00000578183 701 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC018638.8-201ENST00000588755 281 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC011712.1-201ENST00000588959 234 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.9□□□□□ -2.11
PDGFBP01127 AC019193.3-201ENST00000609144 554 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 MIR6504-201ENST00000613520 61 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
PDGFBP01127 MIR6128-201ENST00000615528 109 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 AL133216.2-202ENST00000634512 349 ntBASIC1.9□□□□□ -2.11
PDGFBP01127 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
PDGFBP01127 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
PDGFBP01127 CBX3P1-201ENST00000325243 554 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 Y_RNA.327-201ENST00000365201 102 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 SNORD116-11-201ENST00000383882 92 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 MIR517A-201ENST00000385001 87 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 RPL21P1-201ENST00000399532 476 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 MIR208B-201ENST00000401172 77 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 AP000275.1-201ENST00000411943 390 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.89□□□□□ -2.11
PDGFBP01127 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 MTND1P2-201ENST00000430604 821 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.89□□□□□ -2.11
PDGFBP01127 AL353572.1-201ENST00000442490 417 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms