Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RPL17P35-201ENST00000432217 549 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AC002542.1-201ENST00000440683 193 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.64□□□□□ -2.51
POLR1AO95602 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 MTND2P7-201ENST00000521337 640 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.64□□□□□ -2.51
POLR1AO95602 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.64□□□□□ -2.51
POLR1AO95602 RNA5SP517-201ENST00000364724 117 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 SNORD116-20-201ENST00000384529 92 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 SNORA12-201ENST00000391162 147 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 FCF1P10-201ENST00000407590 479 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
POLR1AO95602 snoU13.8-201ENST00000458890 104 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.65□□□□□ -2.51
POLR1AO95602 RNU4-49P-201ENST00000516080 140 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.65□□□□□ -2.51
POLR1AO95602 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.65□□□□□ -2.51
POLR1AO95602 AC096586.1-201ENST00000610267 561 ntBASIC-0.65□□□□□ -2.51
POLR1AO95602 RNU6-359P-201ENST00000365466 108 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 SNORA12.2-201ENST00000391040 156 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 SNORA75.6-201ENST00000391318 127 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 MIR1305-201ENST00000408300 86 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 RNU6-575P-201ENST00000411326 105 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 RNU7-159P-201ENST00000459284 62 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 MTCO1P31-201ENST00000506355 492 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.66□□□□□ -2.51
POLR1AO95602 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.66□□□□□ -2.51
POLR1AO95602 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.66□□□□□ -2.51
POLR1AO95602 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
POLR1AO95602 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 RNU6-819P-201ENST00000364116 107 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.67□□□□□ -2.52
POLR1AO95602 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.67□□□□□ -2.52
POLR1AO95602 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.67□□□□□ -2.52
POLR1AO95602 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.67□□□□□ -2.52
POLR1AO95602 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 MIR4300-201ENST00000581016 96 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.67□□□□□ -2.52
POLR1AO95602 MTND3P19-201ENST00000603825 345 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AC007014.2-201ENST00000615581 479 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 MIR573-201ENST00000384964 99 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 RNA5SP300-201ENST00000391197 107 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.67□□□□□ -2.52
POLR1AO95602 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.67□□□□□ -2.52
POLR1AO95602 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.67□□□□□ -2.52
POLR1AO95602 AC026782.1-201ENST00000512952 449 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.67□□□□□ -2.52
POLR1AO95602 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AL162424.1-201ENST00000602325 221 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AL513423.1-201ENST00000621695 132 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 uc_338.16-201ENST00000621804 95 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 AL603839.4-201ENST00000624658 1005 ntBASIC-0.67□□□□□ -2.52
POLR1AO95602 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.67□□□□□ -2.52
POLR1AO95602 RNU6-657P-201ENST00000383904 107 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 RPS20P2-201ENST00000402520 389 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 RPL39P6-201ENST00000448289 150 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 RNU7-165P-201ENST00000458864 60 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.68□□□□□ -2.52
POLR1AO95602 LRRC6P1-201ENST00000532188 885 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 AC091946.2-201ENST00000606105 291 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.68□□□□□ -2.52
POLR1AO95602 AL391903.3-201ENST00000612158 163 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 AL356596.1-201ENST00000624230 379 ntBASIC-0.68□□□□□ -2.52
POLR1AO95602 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 SNORA2.2-201ENST00000365473 135 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 AL136310.1-201ENST00000404926 654 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 MIR548H2-201ENST00000408874 88 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.69□□□□□ -2.52
POLR1AO95602 SNORA31.19-201ENST00000517079 126 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.69□□□□□ -2.52
POLR1AO95602 RNU6-114P-201ENST00000384704 105 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.69□□□□□ -2.52
POLR1AO95602 AL133264.1-201ENST00000407157 562 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 MIR1827-201ENST00000408549 66 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 RNU6-994P-201ENST00000410507 111 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.69□□□□□ -2.52
POLR1AO95602 AC026410.2-201ENST00000460281 156 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 RNU1-117P-201ENST00000517041 158 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.69□□□□□ -2.52
POLR1AO95602 AC018889.1-201ENST00000605372 397 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 AC004832.4-201ENST00000608952 331 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 AC008759.3-201ENST00000613300 508 ntBASIC-0.69□□□□□ -2.52
POLR1AO95602 AL139421.1-201ENST00000423010 169 ntBASIC-0.7□□□□□ -2.52
POLR1AO95602 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.7□□□□□ -2.52
POLR1AO95602 RNA5SP135-201ENST00000517019 125 ntBASIC-0.7□□□□□ -2.52
POLR1AO95602 AC027288.2-201ENST00000553028 243 ntBASIC-0.7□□□□□ -2.52
POLR1AO95602 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.7□□□□□ -2.52
POLR1AO95602 AL356094.1-201ENST00000624663 1212 ntBASIC-0.7□□□□□ -2.52
POLR1AO95602 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 RNU4-46P-201ENST00000410818 138 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.71□□□□□ -2.52
POLR1AO95602 ART2BP-201ENST00000453501 499 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms