Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CTDNEP1O95476 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CTDNEP1O95476 SNRPEP10-201ENST00000420249 274 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AL590632.1-201ENST00000424289 371 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 MTND3P9-201ENST00000429526 346 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.42□□□□□ -2.18
CTDNEP1O95476 MTND1P4-201ENST00000435196 415 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC015922.2-201ENST00000435593 184 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 UBE2V1P8-201ENST00000437166 265 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 RNU6-1037P-201ENST00000459571 107 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 RPL9P9-202ENST00000466501 579 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC145146.1-201ENST00000496370 254 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 MIR449C-201ENST00000516047 92 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 MTND1P5-201ENST00000517906 940 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC115990.1-201ENST00000526957 301 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.42□□□□□ -2.18
CTDNEP1O95476 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 MIR3672-201ENST00000584290 82 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AL670379.2-201ENST00000604983 252 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC103810.8-201ENST00000607347 118 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
CTDNEP1O95476 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.42□□□□□ -2.18
CTDNEP1O95476 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CTDNEP1O95476 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 SNORD113-7-201ENST00000363762 77 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 Y_RNA.295-201ENST00000364918 102 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 RNU6-142P-201ENST00000384019 107 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 RNU6-378P-201ENST00000384324 107 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 MTCYBP2-201ENST00000407745 171 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 MIR1283-2-201ENST00000408621 87 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 RNU6-325P-201ENST00000411132 105 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC078809.1-201ENST00000427601 140 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.41□□□□□ -2.18
CTDNEP1O95476 NDUFA5P4-201ENST00000436704 385 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 MTCO3P18-201ENST00000440206 761 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC245102.2-201ENST00000448956 180 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.41□□□□□ -2.18
CTDNEP1O95476 MTND1P11-201ENST00000456661 876 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 RNU7-187P-201ENST00000458985 68 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC022447.4-201ENST00000504053 364 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC100830.2-201ENST00000581636 240 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 MIR3942-201ENST00000585264 109 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 AC023043.2-201ENST00000589678 1026 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.41□□□□□ -2.18
CTDNEP1O95476 AL138726.1-201ENST00000614873 333 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
CTDNEP1O95476 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CTDNEP1O95476 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CTDNEP1O95476 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
CTDNEP1O95476 Y_RNA.6-201ENST00000362350 114 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 RNU6-743P-201ENST00000364151 106 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 Y_RNA.453-201ENST00000384223 109 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 PRELID3BP1-201ENST00000457142 540 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC069439.1-201ENST00000494739 167 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC021146.2-201ENST00000504736 556 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.4□□□□□ -2.19
CTDNEP1O95476 PTP4A1P4-201ENST00000512479 322 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.4□□□□□ -2.19
CTDNEP1O95476 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.4□□□□□ -2.19
CTDNEP1O95476 MRPS36P4-201ENST00000534436 298 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.4□□□□□ -2.19
CTDNEP1O95476 MIR3136-201ENST00000583498 78 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.4□□□□□ -2.19
CTDNEP1O95476 Z98751.3-201ENST00000604447 521 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AL356157.2-201ENST00000605122 111 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AL050343.2-201ENST00000607338 280 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC007014.2-201ENST00000615581 479 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 U1.36-201ENST00000620684 176 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 AC098679.4-201ENST00000624241 654 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 MIR3662-201ENST00000637030 95 ntBASIC1.4□□□□□ -2.19
CTDNEP1O95476 RNU6-227P-201ENST00000362865 103 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 Y_RNA.135-201ENST00000363439 95 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 RNU6-611P-201ENST00000384276 104 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 RNU6-95P-201ENST00000384697 107 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 RNU6-192P-201ENST00000391253 100 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 UBE2V1P4-201ENST00000425374 344 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 MTND1P34-201ENST00000438556 671 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 snoU13.6-201ENST00000458785 104 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC007547.1-201ENST00000462177 490 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC016632.1-201ENST00000503994 196 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 RNU6-1314P-201ENST00000517139 104 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC026371.1-201ENST00000551867 419 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AP000942.3-201ENST00000603702 160 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AP000907.4-201ENST00000604143 237 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 AC073413.2-201ENST00000604332 360 ntBASIC1.39□□□□□ -2.19
CTDNEP1O95476 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms