Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
MBD4O95243 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
MBD4O95243 AL139396.1-201ENST00000421137 167 ntBASIC2.3□□□□□ -2.04
MBD4O95243 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.3□□□□□ -2.04
MBD4O95243 AC016925.1-201ENST00000458303 298 ntBASIC2.3□□□□□ -2.04
MBD4O95243 RPL23AP75-201ENST00000491601 451 ntBASIC2.3□□□□□ -2.04
MBD4O95243 RNA5SP454-201ENST00000517231 127 ntBASIC2.3□□□□□ -2.04
MBD4O95243 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
MBD4O95243 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.3□□□□□ -2.04
MBD4O95243 AC104984.5-201ENST00000586878 94 ntBASIC2.3□□□□□ -2.04
MBD4O95243 AC060780.3-201ENST00000589464 80 ntBASIC2.3□□□□□ -2.04
MBD4O95243 AC016727.2-201ENST00000603988 621 ntBASIC2.3□□□□□ -2.04
MBD4O95243 BNIP3P10-201ENST00000605360 577 ntBASIC2.3□□□□□ -2.04
MBD4O95243 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.3□□□□□ -2.04
MBD4O95243 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.3□□□□□ -2.04
MBD4O95243 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
MBD4O95243 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
MBD4O95243 MTND5P9-201ENST00000503854 1755 ntBASIC2.29□□□□□ -2.04
MBD4O95243 Y_RNA.86-201ENST00000363020 111 ntBASIC2.29□□□□□ -2.04
MBD4O95243 MIR504-201ENST00000385065 83 ntBASIC2.29□□□□□ -2.04
MBD4O95243 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
MBD4O95243 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
MBD4O95243 Y_RNA.619-201ENST00000410951 90 ntBASIC2.29□□□□□ -2.04
MBD4O95243 AL358453.1-201ENST00000422522 250 ntBASIC2.29□□□□□ -2.04
MBD4O95243 SNRPEP8-201ENST00000442866 260 ntBASIC2.29□□□□□ -2.04
MBD4O95243 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.29□□□□□ -2.04
MBD4O95243 AC007215.1-201ENST00000464893 276 ntBASIC2.29□□□□□ -2.04
MBD4O95243 AC116337.1-201ENST00000509680 687 ntBASIC2.29□□□□□ -2.04
MBD4O95243 RNU4-49P-201ENST00000516080 140 ntBASIC2.29□□□□□ -2.04
MBD4O95243 RNU6-566P-201ENST00000516790 107 ntBASIC2.29□□□□□ -2.04
MBD4O95243 RNU1-40P-201ENST00000516816 164 ntBASIC2.29□□□□□ -2.04
MBD4O95243 RNU1-97P-201ENST00000516872 164 ntBASIC2.29□□□□□ -2.04
MBD4O95243 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.29□□□□□ -2.04
MBD4O95243 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.29□□□□□ -2.04
MBD4O95243 AC243960.4-201ENST00000600532 288 ntBASIC2.29□□□□□ -2.04
MBD4O95243 AC092794.1-201ENST00000612734 582 ntBASIC2.29□□□□□ -2.04
MBD4O95243 MIR6845-201ENST00000613182 61 ntBASIC2.29□□□□□ -2.04
MBD4O95243 TCL6_2.1-201ENST00000615162 119 ntBASIC2.29□□□□□ -2.04
MBD4O95243 AL590240.4-201ENST00000616908 390 ntBASIC2.29□□□□□ -2.04
MBD4O95243 AC009248.2-201ENST00000619826 254 ntBASIC2.29□□□□□ -2.04
MBD4O95243 MIR7843-201ENST00000622274 79 ntBASIC2.29□□□□□ -2.04
MBD4O95243 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
MBD4O95243 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.28□□□□□ -2.04
MBD4O95243 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
MBD4O95243 RNU4-9P-201ENST00000364951 139 ntBASIC2.28□□□□□ -2.04
MBD4O95243 MIR300-201ENST00000401138 83 ntBASIC2.28□□□□□ -2.04
MBD4O95243 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.28□□□□□ -2.04
MBD4O95243 AL445685.2-201ENST00000422551 342 ntBASIC2.28□□□□□ -2.04
MBD4O95243 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.28□□□□□ -2.04
MBD4O95243 NFU1P2-201ENST00000448700 469 ntBASIC2.28□□□□□ -2.04
MBD4O95243 MTND1P17-201ENST00000448961 204 ntBASIC2.28□□□□□ -2.04
MBD4O95243 AC007395.1-201ENST00000451333 677 ntBASIC2.28□□□□□ -2.04
MBD4O95243 RNU2-44P-201ENST00000516795 194 ntBASIC2.28□□□□□ -2.04
MBD4O95243 RNU6-1088P-201ENST00000516850 104 ntBASIC2.28□□□□□ -2.04
MBD4O95243 RNU1-54P-201ENST00000517181 120 ntBASIC2.28□□□□□ -2.04
MBD4O95243 MTND4LP26-201ENST00000518144 282 ntBASIC2.28□□□□□ -2.04
MBD4O95243 DEFB131C-201ENST00000528817 165 ntBASIC2.28□□□□□ -2.04
MBD4O95243 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.28□□□□□ -2.04
MBD4O95243 MIR3169-201ENST00000578032 83 ntBASIC2.28□□□□□ -2.04
MBD4O95243 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.28□□□□□ -2.04
MBD4O95243 SNRPGP20-201ENST00000604477 205 ntBASIC2.28□□□□□ -2.04
MBD4O95243 AL627230.6-201ENST00000611129 280 ntBASIC2.28□□□□□ -2.04
MBD4O95243 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.28□□□□□ -2.04
MBD4O95243 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.28□□□□□ -2.04
MBD4O95243 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.28□□□□□ -2.04
MBD4O95243 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.27□□□□□ -2.05
MBD4O95243 MTND4P5-201ENST00000435821 1374 ntBASIC2.27□□□□□ -2.05
MBD4O95243 SNORD115-32-201ENST00000364079 82 ntBASIC2.27□□□□□ -2.05
MBD4O95243 MIR583-201ENST00000384846 75 ntBASIC2.27□□□□□ -2.05
MBD4O95243 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.27□□□□□ -2.05
MBD4O95243 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.27□□□□□ -2.05
MBD4O95243 PMCHL2-203ENST00000457791 237 ntBASIC2.27□□□□□ -2.05
MBD4O95243 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.27□□□□□ -2.05
MBD4O95243 RNU6-358P-201ENST00000516564 75 ntBASIC2.27□□□□□ -2.05
MBD4O95243 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.27□□□□□ -2.05
MBD4O95243 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.27□□□□□ -2.05
MBD4O95243 MIR4299-201ENST00000577899 72 ntBASIC2.27□□□□□ -2.05
MBD4O95243 AC005786.1-201ENST00000588553 154 ntBASIC2.27□□□□□ -2.05
MBD4O95243 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.26□□□□□ -2.05
MBD4O95243 CBX3P1-201ENST00000325243 554 ntBASIC2.26□□□□□ -2.05
MBD4O95243 Y_RNA.72-201ENST00000362894 103 ntBASIC2.26□□□□□ -2.05
MBD4O95243 Y_RNA.132-201ENST00000363421 102 ntBASIC2.26□□□□□ -2.05
MBD4O95243 SNORD114-6-201ENST00000364393 72 ntBASIC2.26□□□□□ -2.05
MBD4O95243 Y_RNA.301-201ENST00000364990 103 ntBASIC2.26□□□□□ -2.05
MBD4O95243 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
MBD4O95243 SNORA8-201ENST00000384574 139 ntBASIC2.26□□□□□ -2.05
MBD4O95243 RNU6-306P-201ENST00000384617 107 ntBASIC2.26□□□□□ -2.05
MBD4O95243 SNORA40.18-201ENST00000391200 128 ntBASIC2.26□□□□□ -2.05
MBD4O95243 RNA5SP212-201ENST00000391223 107 ntBASIC2.26□□□□□ -2.05
MBD4O95243 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
MBD4O95243 AC139712.2-201ENST00000424302 339 ntBASIC2.26□□□□□ -2.05
MBD4O95243 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.26□□□□□ -2.05
MBD4O95243 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.26□□□□□ -2.05
MBD4O95243 AC004386.2-201ENST00000441858 148 ntBASIC2.26□□□□□ -2.05
MBD4O95243 RPL23AP6-201ENST00000446637 472 ntBASIC2.26□□□□□ -2.05
MBD4O95243 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.26□□□□□ -2.05
MBD4O95243 RNU6-295P-201ENST00000516901 104 ntBASIC2.26□□□□□ -2.05
MBD4O95243 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.26□□□□□ -2.05
MBD4O95243 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.26□□□□□ -2.05
MBD4O95243 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms