Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.35□□□□□ -2.47
USH2AO75445 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.35□□□□□ -2.47
USH2AO75445 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.35□□□□□ -2.47
USH2AO75445 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.35□□□□□ -2.47
USH2AO75445 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 RNU6-901P-201ENST00000384593 106 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 MIR7-1-201ENST00000384871 110 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 MIR563-201ENST00000385080 79 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 RNU6-177P-201ENST00000411257 104 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AC022028.1-201ENST00000412054 408 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.35□□□□□ -2.47
USH2AO75445 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.35□□□□□ -2.47
USH2AO75445 RNF138P1-201ENST00000502765 546 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 RNU6-91P-201ENST00000607774 107 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AL163051.2-201ENST00000618976 735 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AL356596.1-201ENST00000624230 379 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AC132825.8-201ENST00000640783 297 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 RNU6-502P-201ENST00000362419 108 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RNU4-30P-201ENST00000410245 143 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RNA5SP261-201ENST00000410536 106 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RPS15AP40-201ENST00000419621 391 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 MTCO2P18-201ENST00000457151 658 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.36□□□□□ -2.47
USH2AO75445 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.36□□□□□ -2.47
USH2AO75445 MTCYBP27-201ENST00000555160 670 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC087481.2-201ENST00000565492 330 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC095057.3-201ENST00000567102 1157 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC100830.2-201ENST00000581636 240 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RMST_4.1-201ENST00000616886 107 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC009318.4-201ENST00000620496 486 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RNU4-56P-201ENST00000364700 142 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RNU6-898P-201ENST00000365627 104 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 SNORA80D-201ENST00000384488 135 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RNU6-576P-201ENST00000390854 102 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AL663109.1-201ENST00000411498 844 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 HSFY7P-201ENST00000432672 318 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 HSFY8P-201ENST00000437934 318 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 HSFY5P-201ENST00000453726 309 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC113398.2-201ENST00000507630 558 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
USH2AO75445 MTCO2P15-201ENST00000532655 656 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC107954.1-201ENST00000565906 727 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC097372.4-201ENST00000625025 466 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 SNORD32A-201ENST00000364805 84 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.36□□□□□ -2.47
USH2AO75445 AL031667.1-201ENST00000440222 725 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC069257.2-201ENST00000441819 155 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 USP9YP25-201ENST00000457708 443 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 RNA5SP66-201ENST00000517178 101 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 MTND2P26-201ENST00000528255 1029 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.36□□□□□ -2.47
USH2AO75445 MIR664B-201ENST00000626756 61 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 MIR655-201ENST00000362159 97 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 SNORA40.8-201ENST00000411034 126 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.36□□□□□ -2.47
USH2AO75445 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.36□□□□□ -2.47
USH2AO75445 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.36□□□□□ -2.47
USH2AO75445 SNRPGP16-201ENST00000533275 226 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 BBIP1P1-201ENST00000602999 279 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC107952.2-201ENST00000606048 486 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AP000484.1-201ENST00000620067 1252 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 AC027309.3-201ENST00000623419 351 ntBASIC-0.36□□□□□ -2.47
USH2AO75445 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.36□□□□□ -2.47
USH2AO75445 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC022364.2-201ENST00000457963 554 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC010655.3-201ENST00000478818 450 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RBBP4P6-201ENST00000508098 202 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC097473.1-201ENST00000508142 408 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 Y_RNA.657-201ENST00000515983 102 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.37□□□□□ -2.47
USH2AO75445 AP002826.1-201ENST00000608835 315 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC131235.4-201ENST00000609288 620 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC096586.2-201ENST00000610260 441 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RNU6-704P-201ENST00000364162 103 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
USH2AO75445 MIR509-1-201ENST00000385265 94 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 MIR509-2-201ENST00000390724 91 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RNA5SP504-201ENST00000410676 117 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RNU4-27P-201ENST00000410889 139 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.37□□□□□ -2.47
USH2AO75445 MTND5P13-201ENST00000513046 1079 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 RNU6-123P-201ENST00000516163 102 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 SNORA31.17-201ENST00000516953 127 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.37□□□□□ -2.47
USH2AO75445 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC024581.2-201ENST00000619986 252 ntBASIC-0.37□□□□□ -2.47
USH2AO75445 AC093875.1-201ENST00000623688 504 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms