Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.11□□□□□ -2.23
NPHP4O75161 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.11□□□□□ -2.23
NPHP4O75161 SUMO2P18-201ENST00000518873 252 ntBASIC1.11□□□□□ -2.23
NPHP4O75161 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.11□□□□□ -2.23
NPHP4O75161 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.11□□□□□ -2.23
NPHP4O75161 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.11□□□□□ -2.23
NPHP4O75161 RNU4-21P-201ENST00000362802 126 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 RNU6-1097P-201ENST00000363586 107 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 U3.9-201ENST00000363823 204 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 RNU4-56P-201ENST00000364700 142 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 SNORD1A-201ENST00000364968 72 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 SNORA72.3-201ENST00000365074 132 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 RNU4-48P-201ENST00000365559 182 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 RNU6-434P-201ENST00000384376 107 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 MTND2P18-201ENST00000419962 1030 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 AC078809.1-201ENST00000427601 140 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 MTCO1P44-201ENST00000441935 243 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.1□□□□□ -2.23
NPHP4O75161 AC091435.1-201ENST00000505442 584 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 RPL39P5-202ENST00000512505 151 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.1□□□□□ -2.23
NPHP4O75161 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.1□□□□□ -2.23
NPHP4O75161 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.1□□□□□ -2.23
NPHP4O75161 RSL24D1P11-201ENST00000591045 491 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 AC006566.1-201ENST00000608943 513 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 MIR6835-201ENST00000621552 64 ntBASIC1.1□□□□□ -2.23
NPHP4O75161 RNU6-181P-201ENST00000363225 107 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 RNU6-266P-201ENST00000364225 107 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 MT-TH-201ENST00000387441 69 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 RN7SKP61-201ENST00000410642 295 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 RNU2-7P-201ENST00000410794 178 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.23
NPHP4O75161 AC245047.4-201ENST00000433189 144 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.09□□□□□ -2.23
NPHP4O75161 RPS26P55-201ENST00000471178 356 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 RPL26P26-201ENST00000480251 434 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.09□□□□□ -2.23
NPHP4O75161 RNU6-445P-201ENST00000516949 107 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 AC036111.3-201ENST00000526389 112 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 AC012414.6-201ENST00000568241 401 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 MIR5583-1-201ENST00000580941 59 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 MIR4422-201ENST00000581938 83 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 Z98751.3-201ENST00000604447 521 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 MIR2909-201ENST00000617113 69 ntBASIC1.09□□□□□ -2.23
NPHP4O75161 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.24
NPHP4O75161 MTND4P14-201ENST00000435799 1354 ntBASIC1.09□□□□□ -2.24
NPHP4O75161 SNORD26-201ENST00000384147 75 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 RNA5SP127-201ENST00000411051 133 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 RPL23AP95-201ENST00000426806 265 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 AL133396.1-201ENST00000432048 687 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 UBE2V1P8-201ENST00000437166 265 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.08□□□□□ -2.24
NPHP4O75161 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.08□□□□□ -2.24
NPHP4O75161 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.08□□□□□ -2.24
NPHP4O75161 SNORD42A-201ENST00000459584 64 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 AC010531.2-201ENST00000465012 153 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 HMGN2P9-201ENST00000476875 229 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.08□□□□□ -2.24
NPHP4O75161 LRRC34P2-201ENST00000514850 553 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 RNU6-1041P-201ENST00000516254 102 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.08□□□□□ -2.24
NPHP4O75161 AC004812.1-201ENST00000540773 146 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 EIF4A1P12-201ENST00000551910 141 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.08□□□□□ -2.24
NPHP4O75161 AC090517.1-201ENST00000569307 266 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 MIR3913-1-201ENST00000577744 102 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 MIR3976-201ENST00000606807 139 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 SNORA43.4-201ENST00000629559 138 ntBASIC1.08□□□□□ -2.24
NPHP4O75161 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NPHP4O75161 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
NPHP4O75161 RNU6-545P-201ENST00000362681 104 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 SNORD31B-201ENST00000364977 69 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 Y_RNA.480-201ENST00000384364 102 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 RNU6-331P-201ENST00000384724 107 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 MIR208B-201ENST00000401172 77 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 AC099513.1-201ENST00000490423 301 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 MTND1P24-201ENST00000552175 861 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.07□□□□□ -2.24
NPHP4O75161 AC245014.2-201ENST00000603689 287 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 AC246785.4-201ENST00000605374 287 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 AC010615.1-201ENST00000594254 1764 ntBASIC1.07□□□□□ -2.24
NPHP4O75161 MIR302D-201ENST00000362275 68 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 Y_RNA.201-201ENST00000364052 96 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RNU6-877P-201ENST00000383868 107 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RNU6-418P-201ENST00000384035 107 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 MIR520A-201ENST00000384862 85 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 SNORA26.3-201ENST00000391119 136 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 SNORA26.8-201ENST00000391306 124 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RNU6-248P-201ENST00000410720 107 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 C8orf59P1-201ENST00000429930 303 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.06□□□□□ -2.24
NPHP4O75161 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.06□□□□□ -2.24
NPHP4O75161 AC007547.1-201ENST00000462177 490 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.06□□□□□ -2.24
NPHP4O75161 AC016632.1-201ENST00000503994 196 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.06□□□□□ -2.24
NPHP4O75161 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms