Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RNU6-53P-201ENST00000365367 106 ntBASIC0.86□□□□□ -2.27
GMDSO60547 RNU6-975P-201ENST00000384296 105 ntBASIC0.86□□□□□ -2.27
GMDSO60547 RNA5SP323-201ENST00000391094 133 ntBASIC0.86□□□□□ -2.27
GMDSO60547 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
GMDSO60547 MIR1253-201ENST00000408273 105 ntBASIC0.86□□□□□ -2.27
GMDSO60547 RNU6-321P-201ENST00000410912 106 ntBASIC0.86□□□□□ -2.27
GMDSO60547 POLR2J4-204ENST00000418424 324 ntBASIC0.86□□□□□ -2.27
GMDSO60547 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.86□□□□□ -2.27
GMDSO60547 AC005840.1-201ENST00000498412 377 ntBASIC0.86□□□□□ -2.27
GMDSO60547 RNU6-1053P-201ENST00000515930 101 ntBASIC0.86□□□□□ -2.27
GMDSO60547 AC106038.2-201ENST00000520706 568 ntBASIC0.86□□□□□ -2.27
GMDSO60547 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.86□□□□□ -2.27
GMDSO60547 AL391840.1-201ENST00000571144 367 ntBASIC0.86□□□□□ -2.27
GMDSO60547 AC011458.1-201ENST00000604034 617 ntBASIC0.86□□□□□ -2.27
GMDSO60547 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.86□□□□□ -2.27
GMDSO60547 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
GMDSO60547 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
GMDSO60547 SNORA33-201ENST00000363664 130 ntBASIC0.85□□□□□ -2.27
GMDSO60547 RNU6-606P-201ENST00000384721 111 ntBASIC0.85□□□□□ -2.27
GMDSO60547 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
GMDSO60547 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.85□□□□□ -2.27
GMDSO60547 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.85□□□□□ -2.27
GMDSO60547 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.85□□□□□ -2.27
GMDSO60547 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.85□□□□□ -2.27
GMDSO60547 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.85□□□□□ -2.27
GMDSO60547 RNU7-167P-201ENST00000459160 62 ntBASIC0.85□□□□□ -2.27
GMDSO60547 COX6CP14-201ENST00000469580 174 ntBASIC0.85□□□□□ -2.27
GMDSO60547 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.85□□□□□ -2.27
GMDSO60547 SNORA31.4-201ENST00000516049 129 ntBASIC0.85□□□□□ -2.27
GMDSO60547 MRPS36P3-201ENST00000519284 130 ntBASIC0.85□□□□□ -2.27
GMDSO60547 MIR5006-201ENST00000583027 110 ntBASIC0.85□□□□□ -2.27
GMDSO60547 AC090616.2-202ENST00000584248 222 ntBASIC0.85□□□□□ -2.27
GMDSO60547 BNIP3P10-201ENST00000605360 577 ntBASIC0.85□□□□□ -2.27
GMDSO60547 U2.17-201ENST00000611454 95 ntBASIC0.85□□□□□ -2.27
GMDSO60547 AL603839.4-201ENST00000624658 1005 ntBASIC0.85□□□□□ -2.27
GMDSO60547 AC068647.2-201ENST00000637380 353 ntBASIC0.85□□□□□ -2.27
GMDSO60547 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.85□□□□□ -2.27
GMDSO60547 RNU6-195P-201ENST00000411352 109 ntBASIC0.84□□□□□ -2.27
GMDSO60547 HMGN1P14-201ENST00000412459 517 ntBASIC0.84□□□□□ -2.27
GMDSO60547 RPS26P42-201ENST00000413485 326 ntBASIC0.84□□□□□ -2.27
GMDSO60547 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.84□□□□□ -2.27
GMDSO60547 AC013410.2-201ENST00000422627 201 ntBASIC0.84□□□□□ -2.27
GMDSO60547 RPL31P35-201ENST00000431058 377 ntBASIC0.84□□□□□ -2.27
GMDSO60547 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.84□□□□□ -2.27
GMDSO60547 NFU1P2-201ENST00000448700 469 ntBASIC0.84□□□□□ -2.27
GMDSO60547 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.84□□□□□ -2.27
GMDSO60547 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.84□□□□□ -2.27
GMDSO60547 DEFB131C-201ENST00000528817 165 ntBASIC0.84□□□□□ -2.27
GMDSO60547 AGGF1P4-201ENST00000568249 801 ntBASIC0.84□□□□□ -2.27
GMDSO60547 MIR548AB-201ENST00000584917 84 ntBASIC0.84□□□□□ -2.27
GMDSO60547 RNU6-85P-201ENST00000605989 107 ntBASIC0.84□□□□□ -2.27
GMDSO60547 AC016597.2-201ENST00000613256 341 ntBASIC0.84□□□□□ -2.27
GMDSO60547 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.84□□□□□ -2.27
GMDSO60547 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.83□□□□□ -2.28
GMDSO60547 RNU5A-2P-201ENST00000384337 116 ntBASIC0.83□□□□□ -2.28
GMDSO60547 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
GMDSO60547 SNORA40.3-201ENST00000390964 122 ntBASIC0.83□□□□□ -2.28
GMDSO60547 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.83□□□□□ -2.28
GMDSO60547 MIR320B2-201ENST00000408479 138 ntBASIC0.83□□□□□ -2.28
GMDSO60547 RN7SKP200-201ENST00000410564 320 ntBASIC0.83□□□□□ -2.28
GMDSO60547 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.83□□□□□ -2.28
GMDSO60547 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.83□□□□□ -2.28
GMDSO60547 HMGN2P34-201ENST00000437647 269 ntBASIC0.83□□□□□ -2.28
GMDSO60547 SNRPFP3-201ENST00000457792 225 ntBASIC0.83□□□□□ -2.28
GMDSO60547 HMGN1P7-201ENST00000491722 313 ntBASIC0.83□□□□□ -2.28
GMDSO60547 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.83□□□□□ -2.28
GMDSO60547 AC105417.1-201ENST00000514691 285 ntBASIC0.83□□□□□ -2.28
GMDSO60547 MTND2P32-201ENST00000521584 1038 ntBASIC0.83□□□□□ -2.28
GMDSO60547 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
GMDSO60547 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.83□□□□□ -2.28
GMDSO60547 AC080078.3-201ENST00000605407 463 ntBASIC0.83□□□□□ -2.28
GMDSO60547 AC009509.4-201ENST00000619202 509 ntBASIC0.83□□□□□ -2.28
GMDSO60547 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.83□□□□□ -2.28
GMDSO60547 MIR337-201ENST00000362281 93 ntBASIC0.82□□□□□ -2.28
GMDSO60547 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
GMDSO60547 RNU6-456P-201ENST00000384493 107 ntBASIC0.82□□□□□ -2.28
GMDSO60547 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
GMDSO60547 RPL21P1-201ENST00000399532 476 ntBASIC0.82□□□□□ -2.28
GMDSO60547 AC011233.1-201ENST00000422812 283 ntBASIC0.82□□□□□ -2.28
GMDSO60547 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.82□□□□□ -2.28
GMDSO60547 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.82□□□□□ -2.28
GMDSO60547 AC004386.2-201ENST00000441858 148 ntBASIC0.82□□□□□ -2.28
GMDSO60547 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.82□□□□□ -2.28
GMDSO60547 AC009237.7-201ENST00000447357 229 ntBASIC0.82□□□□□ -2.28
GMDSO60547 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.82□□□□□ -2.28
GMDSO60547 RNU6-1037P-201ENST00000459571 107 ntBASIC0.82□□□□□ -2.28
GMDSO60547 MTND1P22-201ENST00000510572 951 ntBASIC0.82□□□□□ -2.28
GMDSO60547 SUMO2P16-201ENST00000519475 264 ntBASIC0.82□□□□□ -2.28
GMDSO60547 AL137161.1-201ENST00000532231 390 ntBASIC0.82□□□□□ -2.28
GMDSO60547 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.82□□□□□ -2.28
GMDSO60547 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.82□□□□□ -2.28
GMDSO60547 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
GMDSO60547 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
GMDSO60547 RNU6-227P-201ENST00000362865 103 ntBASIC0.81□□□□□ -2.28
GMDSO60547 MIR586-201ENST00000385035 97 ntBASIC0.81□□□□□ -2.28
GMDSO60547 SNORD12-201ENST00000391002 90 ntBASIC0.81□□□□□ -2.28
GMDSO60547 AL031577.2-201ENST00000404133 280 ntBASIC0.81□□□□□ -2.28
GMDSO60547 AC010099.3-201ENST00000423896 409 ntBASIC0.81□□□□□ -2.28
GMDSO60547 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.81□□□□□ -2.28
GMDSO60547 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms