Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL139095.1-201ENST00000404326 391 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 AL590004.2-201ENST00000404787 371 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 RNA5SP136-201ENST00000410906 107 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 CALM2P4-201ENST00000430810 426 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 AC080013.2-201ENST00000460866 323 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 RPL39P34-201ENST00000477141 156 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 RPL29P14-201ENST00000495837 428 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 RPL23AP91-201ENST00000569211 455 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 MIR4277-201ENST00000578298 84 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 MIR2681-201ENST00000581814 105 ntBASIC4.55□□□□□ -1.68
ACTN4O43707 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ACTN4O43707 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ACTN4O43707 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ACTN4O43707 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTN4O43707 MIR383-201ENST00000362257 73 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 Y_RNA.49-201ENST00000362714 112 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 RNU6-655P-201ENST00000362858 107 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 SNORD35B-201ENST00000363660 87 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 MIR488-201ENST00000365739 83 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 SNORA12-201ENST00000391162 147 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 RNA5SP129-201ENST00000410276 118 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 VDAC1P3-201ENST00000434069 851 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.54□□□□□ -1.68
ACTN4O43707 RN7SL604P-201ENST00000492589 296 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 AC010598.1-201ENST00000510378 103 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 RNA5SP20-201ENST00000515976 84 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 RNA5SP468-201ENST00000516782 93 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 SNORD19.2-201ENST00000516978 73 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 GNRHR2P1-201ENST00000555315 631 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 RN7SL600P-201ENST00000581811 299 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 MIR3138-201ENST00000585238 82 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 AC012493.2-201ENST00000595083 291 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 AL442128.1-201ENST00000615151 90 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 AC015726.2-201ENST00000620112 122 ntBASIC4.54□□□□□ -1.68
ACTN4O43707 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTN4O43707 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTN4O43707 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTN4O43707 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTN4O43707 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTN4O43707 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ACTN4O43707 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.53□□□□□ -1.68
ACTN4O43707 AL133412.1-201ENST00000380194 2992 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.53□□□□□ -1.68
ACTN4O43707 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ACTN4O43707 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.53□□□□□ -1.68
ACTN4O43707 snoU2_19.1-201ENST00000362361 80 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 Y_RNA.220-201ENST00000364244 109 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.53□□□□□ -1.68
ACTN4O43707 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.53□□□□□ -1.68
ACTN4O43707 AC078918.1-201ENST00000498515 228 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 RN7SKP12-201ENST00000516275 143 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 Y_RNA.685-201ENST00000516532 108 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 AC027419.1-201ENST00000522976 328 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 AL365205.2-201ENST00000594586 68 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 MIR8059-201ENST00000620427 81 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.53□□□□□ -1.68
ACTN4O43707 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
ACTN4O43707 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ACTN4O43707 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ACTN4O43707 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.53□□□□□ -1.68
ACTN4O43707 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ACTN4O43707 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTN4O43707 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ACTN4O43707 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ACTN4O43707 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
ACTN4O43707 RNU1-32P-201ENST00000363937 159 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 RNA5SP511-201ENST00000410487 115 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTN4O43707 SNORD65B-201ENST00000459126 73 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 RNU7-57P-201ENST00000459540 60 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 AC006463.2-201ENST00000473326 348 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 RNU6-126P-201ENST00000516685 103 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.52□□□□□ -1.69
ACTN4O43707 AC025627.2-201ENST00000576220 160 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ACTN4O43707 AL929325.1-201ENST00000603096 117 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 HSPE1P7-201ENST00000604681 321 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 MIR6748-201ENST00000610433 71 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 Pinc.1-201ENST00000616452 154 ntBASIC4.52□□□□□ -1.69
ACTN4O43707 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.52□□□□□ -1.69
ACTN4O43707 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ACTN4O43707 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ACTN4O43707 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ACTN4O43707 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.52□□□□□ -1.69
ACTN4O43707 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTN4O43707 AC058791.1-201ENST00000608412 3198 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 Z82217.1-201ENST00000625157 8149 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.51□□□□□ -1.69
ACTN4O43707 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTN4O43707 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ACTN4O43707 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.51□□□□□ -1.69
ACTN4O43707 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ACTN4O43707 SNORA63.5-201ENST00000363548 123 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 MIR607-201ENST00000385241 96 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 MIR147B-201ENST00000390185 80 ntBASIC4.51□□□□□ -1.69
ACTN4O43707 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.51□□□□□ -1.69
ACTN4O43707 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms