Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 snoU13.6-201ENST00000458785 104 ntBASIC2.49□□□□□ -2.01
LDB2O43679 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB2O43679 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.49□□□□□ -2.01
LDB2O43679 RNA5SP148-201ENST00000516527 94 ntBASIC2.49□□□□□ -2.01
LDB2O43679 RNU6-1046P-201ENST00000516538 107 ntBASIC2.49□□□□□ -2.01
LDB2O43679 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB2O43679 AC040926.1-201ENST00000530195 238 ntBASIC2.49□□□□□ -2.01
LDB2O43679 AC113195.1-201ENST00000579952 141 ntBASIC2.49□□□□□ -2.01
LDB2O43679 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB2O43679 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDB2O43679 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDB2O43679 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDB2O43679 RNU6-486P-201ENST00000363116 107 ntBASIC2.48□□□□□ -2.01
LDB2O43679 SNORD115-8-201ENST00000363856 82 ntBASIC2.48□□□□□ -2.01
LDB2O43679 SNORA25.6-201ENST00000364121 118 ntBASIC2.48□□□□□ -2.01
LDB2O43679 RNU6-450P-201ENST00000364654 107 ntBASIC2.48□□□□□ -2.01
LDB2O43679 SNORD115-38-201ENST00000365037 82 ntBASIC2.48□□□□□ -2.01
LDB2O43679 Y_RNA.319-201ENST00000365138 92 ntBASIC2.48□□□□□ -2.01
LDB2O43679 Y_RNA.380-201ENST00000365663 111 ntBASIC2.48□□□□□ -2.01
LDB2O43679 RNU1-139P-201ENST00000391307 165 ntBASIC2.48□□□□□ -2.01
LDB2O43679 CBX3P9-201ENST00000402326 552 ntBASIC2.48□□□□□ -2.01
LDB2O43679 AL358176.2-201ENST00000425769 204 ntBASIC2.48□□□□□ -2.01
LDB2O43679 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.48□□□□□ -2.01
LDB2O43679 AP000705.1-201ENST00000454567 350 ntBASIC2.48□□□□□ -2.01
LDB2O43679 RNU2-53P-201ENST00000516257 147 ntBASIC2.48□□□□□ -2.01
LDB2O43679 RN7SKP40-201ENST00000517211 242 ntBASIC2.48□□□□□ -2.01
LDB2O43679 AC027288.2-201ENST00000553028 243 ntBASIC2.48□□□□□ -2.01
LDB2O43679 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.48□□□□□ -2.01
LDB2O43679 AC103810.1-201ENST00000579873 453 ntBASIC2.48□□□□□ -2.01
LDB2O43679 AC124312.5-201ENST00000604451 268 ntBASIC2.48□□□□□ -2.01
LDB2O43679 AL138963.2-201ENST00000605137 226 ntBASIC2.48□□□□□ -2.01
LDB2O43679 AC013412.1-201ENST00000610687 192 ntBASIC2.48□□□□□ -2.01
LDB2O43679 AC005520.5-201ENST00000613926 164 ntBASIC2.48□□□□□ -2.01
LDB2O43679 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
LDB2O43679 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LDB2O43679 Z82195.2-201ENST00000612348 18351 ntBASIC2.48□□□□□ -2.01
LDB2O43679 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LDB2O43679 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LDB2O43679 RNU6-222P-201ENST00000362438 107 ntBASIC2.47□□□□□ -2.01
LDB2O43679 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
LDB2O43679 Y_RNA.557-201ENST00000384680 107 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AL590556.1-201ENST00000423231 483 ntBASIC2.47□□□□□ -2.01
LDB2O43679 EIF4EP4-201ENST00000424916 578 ntBASIC2.47□□□□□ -2.01
LDB2O43679 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.47□□□□□ -2.01
LDB2O43679 MTND3P2-201ENST00000438452 342 ntBASIC2.47□□□□□ -2.01
LDB2O43679 MTCO3P8-201ENST00000453691 755 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AP000870.1-201ENST00000472927 406 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AC107032.1-201ENST00000485945 480 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AC132942.1-201ENST00000486753 483 ntBASIC2.47□□□□□ -2.01
LDB2O43679 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.47□□□□□ -2.01
LDB2O43679 SNORA25.11-201ENST00000515935 105 ntBASIC2.47□□□□□ -2.01
LDB2O43679 RNU6-1114P-201ENST00000516022 107 ntBASIC2.47□□□□□ -2.01
LDB2O43679 RPPH1-2P-201ENST00000516688 293 ntBASIC2.47□□□□□ -2.01
LDB2O43679 RNU6-1198P-201ENST00000516904 67 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.47□□□□□ -2.01
LDB2O43679 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.47□□□□□ -2.01
LDB2O43679 AC004486.1-201ENST00000546846 233 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AL442163.3-201ENST00000554110 156 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AL117187.1-201ENST00000555482 181 ntBASIC2.47□□□□□ -2.01
LDB2O43679 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LDB2O43679 MIR3923-201ENST00000579521 83 ntBASIC2.47□□□□□ -2.01
LDB2O43679 MIR3670-2-201ENST00000582974 65 ntBASIC2.47□□□□□ -2.01
LDB2O43679 MIR3670-1-201ENST00000584160 65 ntBASIC2.47□□□□□ -2.01
LDB2O43679 MIR3670-3-201ENST00000584855 65 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
LDB2O43679 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LDB2O43679 MIR3670-4-201ENST00000612260 65 ntBASIC2.47□□□□□ -2.01
LDB2O43679 U4.3-201ENST00000621047 82 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AL078596.1-201ENST00000624856 447 ntBASIC2.47□□□□□ -2.01
LDB2O43679 AC010329.5-201ENST00000623497 2174 ntBASIC2.47□□□□□ -2.01
LDB2O43679 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LDB2O43679 RNU4-50P-201ENST00000364361 141 ntBASIC2.46□□□□□ -2.02
LDB2O43679 SNORA63.7-201ENST00000365579 123 ntBASIC2.46□□□□□ -2.02
LDB2O43679 RNU6-541P-201ENST00000384709 110 ntBASIC2.46□□□□□ -2.02
LDB2O43679 RNU6-1105P-201ENST00000384774 107 ntBASIC2.46□□□□□ -2.02
LDB2O43679 MIR548F4-201ENST00000408515 105 ntBASIC2.46□□□□□ -2.02
LDB2O43679 MIR1252-201ENST00000408861 65 ntBASIC2.46□□□□□ -2.02
LDB2O43679 HMGN2P35-201ENST00000412164 270 ntBASIC2.46□□□□□ -2.02
LDB2O43679 AC092427.1-202ENST00000430569 476 ntBASIC2.46□□□□□ -2.02
LDB2O43679 MICF-203ENST00000432679 129 ntBASIC2.46□□□□□ -2.02
LDB2O43679 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.46□□□□□ -2.02
LDB2O43679 AL513328.1-201ENST00000446460 224 ntBASIC2.46□□□□□ -2.02
LDB2O43679 U8.22-201ENST00000459141 133 ntBASIC2.46□□□□□ -2.02
LDB2O43679 RPL23AP70-201ENST00000483361 460 ntBASIC2.46□□□□□ -2.02
LDB2O43679 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
LDB2O43679 Y_RNA.715-201ENST00000517082 110 ntBASIC2.46□□□□□ -2.02
LDB2O43679 RPS29P30-201ENST00000600975 111 ntBASIC2.46□□□□□ -2.02
LDB2O43679 AL355297.3-201ENST00000604082 446 ntBASIC2.46□□□□□ -2.02
LDB2O43679 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.46□□□□□ -2.02
LDB2O43679 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.46□□□□□ -2.02
LDB2O43679 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.46□□□□□ -2.02
LDB2O43679 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.45□□□□□ -2.02
LDB2O43679 AC069528.2-201ENST00000624849 1991 ntBASIC2.45□□□□□ -2.02
LDB2O43679 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LDB2O43679 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.45□□□□□ -2.02
LDB2O43679 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LDB2O43679 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LDB2O43679 Y_RNA.27-201ENST00000362540 103 ntBASIC2.45□□□□□ -2.02
LDB2O43679 RNU6-1309P-201ENST00000363305 108 ntBASIC2.45□□□□□ -2.02
LDB2O43679 Y_RNA.153-201ENST00000363615 91 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms