Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SNORA27.4-201ENST00000516650 95 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 SCARNA13-201ENST00000516672 275 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.777-201ENST00000516982 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AC021231.3-201ENST00000558497 370 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.56□□□□□ -1.84
SRGAP3O43295 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.56□□□□□ -1.84
SRGAP3O43295 MIR4282-201ENST00000583613 67 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.771-201ENST00000598668 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AC011921.3-201ENST00000605540 361 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AL357075.2-201ENST00000614906 189 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AC068831.7-201ENST00000616954 363 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.789-201ENST00000622480 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AC006386.2-201ENST00000624491 75 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AC012005.1-201ENST00000624575 75 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.56□□□□□ -1.84
SRGAP3O43295 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SRGAP3O43295 UBE2WP1-201ENST00000362030 340 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 Y_RNA.8-201ENST00000362353 102 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 Y_RNA.233-201ENST00000364407 101 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 Y_RNA.308-201ENST00000365043 101 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 RPL23AP36-201ENST00000413895 458 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 YPEL5P1-201ENST00000419731 367 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 AC009237.7-201ENST00000447357 229 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.55□□□□□ -1.84
SRGAP3O43295 AC007395.1-201ENST00000451333 677 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 AP000873.1-201ENST00000463987 400 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 AC091021.1-201ENST00000468051 388 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.55□□□□□ -1.84
SRGAP3O43295 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.55□□□□□ -1.84
SRGAP3O43295 RNY3P16-201ENST00000516338 101 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.55□□□□□ -1.84
SRGAP3O43295 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.55□□□□□ -1.84
SRGAP3O43295 AC009163.5-201ENST00000575421 637 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 MIR4506-201ENST00000584693 77 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.55□□□□□ -1.84
SRGAP3O43295 AC010999.1-201ENST00000611856 324 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 AL590240.4-201ENST00000616908 390 ntBASIC3.55□□□□□ -1.84
SRGAP3O43295 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.55□□□□□ -1.84
SRGAP3O43295 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SRGAP3O43295 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SRGAP3O43295 AC092268.1-201ENST00000342691 405 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 RNU6-1035P-201ENST00000384477 107 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 MIR548I2-201ENST00000408348 149 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 COTL1P1-201ENST00000422309 375 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 RPL39P29-201ENST00000447779 157 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 AP000705.1-201ENST00000454567 350 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 AP001324.2-201ENST00000461163 319 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 RNA5SP385-201ENST00000515947 110 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.54□□□□□ -1.84
SRGAP3O43295 LARP7P3-201ENST00000579888 337 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.54□□□□□ -1.84
SRGAP3O43295 AC104465.1-201ENST00000611365 139 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.54□□□□□ -1.84
SRGAP3O43295 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SRGAP3O43295 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SRGAP3O43295 AL355596.1-201ENST00000565399 3996 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.53□□□□□ -1.84
SRGAP3O43295 Y_RNA.136-201ENST00000363444 102 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 SNORD115-8-201ENST00000363856 82 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 SNORA51.4-201ENST00000364993 124 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 SNORD115-38-201ENST00000365037 82 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 MTATP6P29-201ENST00000415057 132 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC024067.1-201ENST00000426199 223 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC025750.2-201ENST00000442609 450 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.53□□□□□ -1.84
SRGAP3O43295 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.53□□□□□ -1.84
SRGAP3O43295 UQCRBP2-201ENST00000447827 297 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC005042.3-201ENST00000453230 174 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AP004217.1-201ENST00000480579 346 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 RNU5F-8P-201ENST00000515941 111 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 RNU6-346P-201ENST00000516288 111 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.53□□□□□ -1.84
SRGAP3O43295 MZT1P2-201ENST00000604387 248 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC005828.6-201ENST00000606610 232 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC073349.3-201ENST00000617616 186 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC073308.1-201ENST00000623696 305 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 AC048347.1-201ENST00000624621 427 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 MIR3529-201ENST00000637713 78 ntBASIC3.53□□□□□ -1.84
SRGAP3O43295 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.52□□□□□ -1.85
SRGAP3O43295 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.52□□□□□ -1.85
SRGAP3O43295 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 ZNF204P-201ENST00000416749 2397 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 RNU6-1285P-201ENST00000363480 105 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 SNORA80A-201ENST00000363922 136 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 RNU6-804P-201ENST00000384286 107 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 MIR512-1-201ENST00000384913 84 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 MIR549A-201ENST00000385268 96 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 RNU6-918P-201ENST00000391219 106 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 Y_RNA.597-201ENST00000410463 100 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 AC099548.1-201ENST00000421443 426 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 AC019205.3-201ENST00000424573 156 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 AC078809.1-201ENST00000427601 140 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 AC112220.1-201ENST00000434628 355 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 RNU6-625P-201ENST00000459412 107 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 RPL21P104-201ENST00000464143 478 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.52□□□□□ -1.85
SRGAP3O43295 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.52□□□□□ -1.85
SRGAP3O43295 RNA5SP54-201ENST00000516951 92 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 CKS1BP7-201ENST00000522230 235 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms