Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MIR559-201ENST00000385188 96 ntBASIC1.92□□□□□ -2.1
PHF1O43189 CBX3P9-201ENST00000402326 552 ntBASIC1.92□□□□□ -2.1
PHF1O43189 SNORD23.1-201ENST00000408212 104 ntBASIC1.92□□□□□ -2.1
PHF1O43189 RPS26P42-201ENST00000413485 326 ntBASIC1.92□□□□□ -2.1
PHF1O43189 Z82205.1-201ENST00000428456 297 ntBASIC1.92□□□□□ -2.1
PHF1O43189 RPL30P4-201ENST00000429309 333 ntBASIC1.92□□□□□ -2.1
PHF1O43189 IPO7P1-201ENST00000442031 636 ntBASIC1.92□□□□□ -2.1
PHF1O43189 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.92□□□□□ -2.1
PHF1O43189 FO393415.2-201ENST00000480085 343 ntBASIC1.92□□□□□ -2.1
PHF1O43189 RPL30P10-201ENST00000488148 337 ntBASIC1.92□□□□□ -2.1
PHF1O43189 AC104564.1-201ENST00000493028 407 ntBASIC1.92□□□□□ -2.1
PHF1O43189 RPL22P13-201ENST00000493291 347 ntBASIC1.92□□□□□ -2.1
PHF1O43189 HMGB1P35-201ENST00000503360 598 ntBASIC1.92□□□□□ -2.1
PHF1O43189 SCARNA16.2-201ENST00000516520 172 ntBASIC1.92□□□□□ -2.1
PHF1O43189 RNU6-307P-201ENST00000516743 106 ntBASIC1.92□□□□□ -2.1
PHF1O43189 SCARNA3-201ENST00000517097 143 ntBASIC1.92□□□□□ -2.1
PHF1O43189 HSPE1P4-201ENST00000550617 308 ntBASIC1.92□□□□□ -2.1
PHF1O43189 MIR3199-1-201ENST00000582434 88 ntBASIC1.92□□□□□ -2.1
PHF1O43189 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.92□□□□□ -2.1
PHF1O43189 MIR3136-201ENST00000583498 78 ntBASIC1.92□□□□□ -2.1
PHF1O43189 CYP2C61P-201ENST00000604072 290 ntBASIC1.92□□□□□ -2.1
PHF1O43189 AC005520.5-201ENST00000613926 164 ntBASIC1.92□□□□□ -2.1
PHF1O43189 AC133104.2-201ENST00000615272 193 ntBASIC1.92□□□□□ -2.1
PHF1O43189 AC084781.2-201ENST00000615568 161 ntBASIC1.92□□□□□ -2.1
PHF1O43189 PISRT1.1-201ENST00000616930 107 ntBASIC1.92□□□□□ -2.1
PHF1O43189 AC091925.1-201ENST00000623204 462 ntBASIC1.92□□□□□ -2.1
PHF1O43189 MTND5P6-201ENST00000422338 1798 ntBASIC1.92□□□□□ -2.1
PHF1O43189 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
PHF1O43189 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.92□□□□□ -2.1
PHF1O43189 MTND5P10-201ENST00000603719 1809 ntBASIC1.91□□□□□ -2.1
PHF1O43189 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PHF1O43189 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PHF1O43189 RNU6-694P-201ENST00000364071 147 ntBASIC1.91□□□□□ -2.1
PHF1O43189 RNU6-1040P-201ENST00000383974 107 ntBASIC1.91□□□□□ -2.1
PHF1O43189 RNU6-142P-201ENST00000384019 107 ntBASIC1.91□□□□□ -2.1
PHF1O43189 Y_RNA.419-201ENST00000384041 102 ntBASIC1.91□□□□□ -2.1
PHF1O43189 SNORA29-201ENST00000384183 140 ntBASIC1.91□□□□□ -2.1
PHF1O43189 RNU6-331P-201ENST00000384724 107 ntBASIC1.91□□□□□ -2.1
PHF1O43189 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PHF1O43189 Y_RNA.579-201ENST00000390939 94 ntBASIC1.91□□□□□ -2.1
PHF1O43189 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
PHF1O43189 RNA5SP201-201ENST00000410316 124 ntBASIC1.91□□□□□ -2.1
PHF1O43189 RNU6-1304P-201ENST00000411374 106 ntBASIC1.91□□□□□ -2.1
PHF1O43189 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.91□□□□□ -2.1
PHF1O43189 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.91□□□□□ -2.1
PHF1O43189 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.91□□□□□ -2.1
PHF1O43189 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
PHF1O43189 AF186996.7-201ENST00000492781 209 ntBASIC1.91□□□□□ -2.1
PHF1O43189 SNORA31.16-201ENST00000516773 139 ntBASIC1.91□□□□□ -2.1
PHF1O43189 MRPS36P4-201ENST00000534436 298 ntBASIC1.91□□□□□ -2.1
PHF1O43189 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.91□□□□□ -2.1
PHF1O43189 AC021231.3-201ENST00000558497 370 ntBASIC1.91□□□□□ -2.1
PHF1O43189 SUB1P3-201ENST00000564581 315 ntBASIC1.91□□□□□ -2.1
PHF1O43189 AC093249.1-201ENST00000567049 203 ntBASIC1.91□□□□□ -2.1
PHF1O43189 MIR4719-201ENST00000585233 84 ntBASIC1.91□□□□□ -2.1
PHF1O43189 MIR6840-201ENST00000611937 71 ntBASIC1.91□□□□□ -2.1
PHF1O43189 AC090574.1-201ENST00000623186 233 ntBASIC1.91□□□□□ -2.1
PHF1O43189 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
PHF1O43189 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
PHF1O43189 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
PHF1O43189 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
PHF1O43189 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PHF1O43189 Y_RNA.2-201ENST00000362330 96 ntBASIC1.9□□□□□ -2.11
PHF1O43189 RNU6-655P-201ENST00000362858 107 ntBASIC1.9□□□□□ -2.11
PHF1O43189 SNORD115-32-201ENST00000364079 82 ntBASIC1.9□□□□□ -2.11
PHF1O43189 RNU6-968P-201ENST00000384076 107 ntBASIC1.9□□□□□ -2.11
PHF1O43189 Y_RNA.466-201ENST00000384294 113 ntBASIC1.9□□□□□ -2.11
PHF1O43189 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
PHF1O43189 MIR95-201ENST00000385072 81 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.9□□□□□ -2.11
PHF1O43189 AL354751.2-201ENST00000415471 210 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC138623.1-201ENST00000418060 216 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.9□□□□□ -2.11
PHF1O43189 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.9□□□□□ -2.11
PHF1O43189 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.9□□□□□ -2.11
PHF1O43189 MTCYBP6-201ENST00000441810 138 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC245517.4-201ENST00000448601 281 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.9□□□□□ -2.11
PHF1O43189 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
PHF1O43189 RPL23AP75-201ENST00000491601 451 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.9□□□□□ -2.11
PHF1O43189 AC093303.1-201ENST00000514549 295 ntBASIC1.9□□□□□ -2.11
PHF1O43189 RNA5SP445-201ENST00000515889 115 ntBASIC1.9□□□□□ -2.11
PHF1O43189 RNU6-470P-201ENST00000515954 104 ntBASIC1.9□□□□□ -2.11
PHF1O43189 RNU2-53P-201ENST00000516257 147 ntBASIC1.9□□□□□ -2.11
PHF1O43189 RNU6-295P-201ENST00000516901 104 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.9□□□□□ -2.11
PHF1O43189 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.9□□□□□ -2.11
PHF1O43189 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.9□□□□□ -2.11
PHF1O43189 AC104581.2-201ENST00000572227 430 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AC105245.1-201ENST00000581934 244 ntBASIC1.9□□□□□ -2.11
PHF1O43189 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.9□□□□□ -2.11
PHF1O43189 Z98751.3-201ENST00000604447 521 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AL080274.1-201ENST00000605565 220 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.9□□□□□ -2.11
PHF1O43189 AC022140.2-201ENST00000623500 188 ntBASIC1.9□□□□□ -2.11
PHF1O43189 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
PHF1O43189 SNORD98-201ENST00000636377 67 ntBASIC1.9□□□□□ -2.11
PHF1O43189 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PHF1O43189 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms