Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC007969.2-201ENST00000441891 191 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RPL39P29-201ENST00000447779 157 ntBASIC1.87□□□□□ -2.11
CDX4O14627 MTCO3P10-201ENST00000455912 772 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RPL30P15-201ENST00000457129 321 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RNU6-1037P-201ENST00000459571 107 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RPL9P9-202ENST00000466501 579 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RPL7P42-201ENST00000481005 679 ntBASIC1.87□□□□□ -2.11
CDX4O14627 AC005741.1-201ENST00000511094 432 ntBASIC1.87□□□□□ -2.11
CDX4O14627 AC026782.1-201ENST00000512952 449 ntBASIC1.87□□□□□ -2.11
CDX4O14627 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.87□□□□□ -2.11
CDX4O14627 RNU6-1016P-201ENST00000516689 94 ntBASIC1.87□□□□□ -2.11
CDX4O14627 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.87□□□□□ -2.11
CDX4O14627 AC009127.3-201ENST00000570531 403 ntBASIC1.87□□□□□ -2.11
CDX4O14627 AC018462.2-201ENST00000605375 395 ntBASIC1.87□□□□□ -2.11
CDX4O14627 AC124303.1-201ENST00000605703 360 ntBASIC1.87□□□□□ -2.11
CDX4O14627 MIR3976-201ENST00000606807 139 ntBASIC1.87□□□□□ -2.11
CDX4O14627 AC009229.3-201ENST00000608056 282 ntBASIC1.87□□□□□ -2.11
CDX4O14627 MIR6895-201ENST00000613497 78 ntBASIC1.87□□□□□ -2.11
CDX4O14627 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.87□□□□□ -2.11
CDX4O14627 AC097372.5-201ENST00000623665 376 ntBASIC1.87□□□□□ -2.11
CDX4O14627 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDX4O14627 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
CDX4O14627 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDX4O14627 KPNA2P1-201ENST00000458289 1591 ntBASIC1.86□□□□□ -2.11
CDX4O14627 Y_RNA.138-201ENST00000363462 102 ntBASIC1.86□□□□□ -2.11
CDX4O14627 RNU6-336P-201ENST00000364891 107 ntBASIC1.86□□□□□ -2.11
CDX4O14627 RNU6-43P-201ENST00000384302 107 ntBASIC1.86□□□□□ -2.11
CDX4O14627 RNU6-790P-201ENST00000384479 105 ntBASIC1.86□□□□□ -2.11
CDX4O14627 RNU6-310P-201ENST00000384655 107 ntBASIC1.86□□□□□ -2.11
CDX4O14627 RNU6-1011P-201ENST00000384668 107 ntBASIC1.86□□□□□ -2.11
CDX4O14627 MIR544A-201ENST00000384855 91 ntBASIC1.86□□□□□ -2.11
CDX4O14627 MIR518E-201ENST00000385252 88 ntBASIC1.86□□□□□ -2.11
CDX4O14627 CBX3P9-201ENST00000402326 552 ntBASIC1.86□□□□□ -2.11
CDX4O14627 Y_RNA.594-201ENST00000410373 140 ntBASIC1.86□□□□□ -2.11
CDX4O14627 Y_RNA.646-201ENST00000410980 101 ntBASIC1.86□□□□□ -2.11
CDX4O14627 MTCO2P27-201ENST00000420740 428 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.86□□□□□ -2.11
CDX4O14627 AL161788.1-201ENST00000441805 169 ntBASIC1.86□□□□□ -2.11
CDX4O14627 PCMTD1P1-201ENST00000455560 355 ntBASIC1.86□□□□□ -2.11
CDX4O14627 RPL30P12-201ENST00000474666 353 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AL121594.1-201ENST00000475906 575 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AC027575.1-201ENST00000481064 460 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.86□□□□□ -2.11
CDX4O14627 PTP4A1P4-201ENST00000512479 322 ntBASIC1.86□□□□□ -2.11
CDX4O14627 RNA5SP402-201ENST00000517148 110 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.86□□□□□ -2.11
CDX4O14627 IGLV3-17-201ENST00000519099 244 ntBASIC1.86□□□□□ -2.11
CDX4O14627 CBX3P7-201ENST00000532876 502 ntBASIC1.86□□□□□ -2.11
CDX4O14627 PRELID2P1-201ENST00000552837 301 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.86□□□□□ -2.11
CDX4O14627 MIR5690-201ENST00000583739 73 ntBASIC1.86□□□□□ -2.11
CDX4O14627 MIR4719-201ENST00000585233 84 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AC009314.1-201ENST00000603871 304 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AL355297.2-201ENST00000604792 129 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AP000654.2-201ENST00000605633 586 ntBASIC1.86□□□□□ -2.11
CDX4O14627 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AC012640.5-201ENST00000623897 319 ntBASIC1.86□□□□□ -2.11
CDX4O14627 AL669831.3-213ENST00000636676 183 ntBASIC1.86□□□□□ -2.11
CDX4O14627 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
CDX4O14627 MTND4P23-201ENST00000447723 1363 ntBASIC1.85□□□□□ -2.11
CDX4O14627 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CDX4O14627 MIR369-201ENST00000362155 70 ntBASIC1.85□□□□□ -2.11
CDX4O14627 RNU6-593P-201ENST00000364716 112 ntBASIC1.85□□□□□ -2.11
CDX4O14627 Y_RNA.315-201ENST00000365117 102 ntBASIC1.85□□□□□ -2.11
CDX4O14627 Y_RNA.431-201ENST00000384086 102 ntBASIC1.85□□□□□ -2.11
CDX4O14627 RNU6-842P-201ENST00000384269 107 ntBASIC1.85□□□□□ -2.11
CDX4O14627 RNU6-331P-201ENST00000384724 107 ntBASIC1.85□□□□□ -2.11
CDX4O14627 MIR29B2-201ENST00000385055 81 ntBASIC1.85□□□□□ -2.11
CDX4O14627 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
CDX4O14627 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDX4O14627 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDX4O14627 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.85□□□□□ -2.11
CDX4O14627 AL354751.2-201ENST00000415471 210 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.85□□□□□ -2.11
CDX4O14627 AL590556.1-201ENST00000423231 483 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AC008267.5-201ENST00000424928 265 ntBASIC1.85□□□□□ -2.11
CDX4O14627 MTCO2P12-201ENST00000427426 682 ntBASIC1.85□□□□□ -2.11
CDX4O14627 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.85□□□□□ -2.11
CDX4O14627 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
CDX4O14627 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDX4O14627 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.85□□□□□ -2.11
CDX4O14627 SNORD5.1-201ENST00000458800 75 ntBASIC1.85□□□□□ -2.11
CDX4O14627 Y_RNA.653-201ENST00000459091 95 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AC068781.1-201ENST00000488231 618 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AC093303.1-201ENST00000514549 295 ntBASIC1.85□□□□□ -2.11
CDX4O14627 RNA5SP384-201ENST00000516615 116 ntBASIC1.85□□□□□ -2.11
CDX4O14627 Y_RNA.708-201ENST00000516950 96 ntBASIC1.85□□□□□ -2.11
CDX4O14627 RNU6-250P-201ENST00000516958 103 ntBASIC1.85□□□□□ -2.11
CDX4O14627 RNU6-586P-201ENST00000517265 104 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AC093249.1-201ENST00000567049 203 ntBASIC1.85□□□□□ -2.11
CDX4O14627 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AC080078.3-201ENST00000605407 463 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AL133215.3-201ENST00000609801 448 ntBASIC1.85□□□□□ -2.11
CDX4O14627 MIR8081-201ENST00000611533 95 ntBASIC1.85□□□□□ -2.11
CDX4O14627 PISRT1.1-201ENST00000616930 107 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AC098657.3-201ENST00000620434 263 ntBASIC1.85□□□□□ -2.11
CDX4O14627 AC099654.10-201ENST00000640395 161 ntBASIC1.85□□□□□ -2.11
CDX4O14627 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.85□□□□□ -2.11
CDX4O14627 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms