Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.82□□□□□ -2.12
CUX2O14529 AC145146.1-201ENST00000496370 254 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AC079140.3-201ENST00000511111 550 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AC104073.3-201ENST00000610942 955 ntBASIC1.82□□□□□ -2.12
CUX2O14529 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
CUX2O14529 RNU1-58P-201ENST00000362413 163 ntBASIC1.81□□□□□ -2.12
CUX2O14529 RNU4-15P-201ENST00000362613 141 ntBASIC1.81□□□□□ -2.12
CUX2O14529 Y_RNA.255-201ENST00000364581 97 ntBASIC1.81□□□□□ -2.12
CUX2O14529 SNORD14D-201ENST00000384390 87 ntBASIC1.81□□□□□ -2.12
CUX2O14529 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CUX2O14529 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.81□□□□□ -2.12
CUX2O14529 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
CUX2O14529 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.81□□□□□ -2.12
CUX2O14529 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.81□□□□□ -2.12
CUX2O14529 MTCO2P16-201ENST00000436962 677 ntBASIC1.81□□□□□ -2.12
CUX2O14529 AL121601.2-201ENST00000438019 707 ntBASIC1.81□□□□□ -2.12
CUX2O14529 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.81□□□□□ -2.12
CUX2O14529 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.81□□□□□ -2.12
CUX2O14529 MTCO3P23-201ENST00000561363 289 ntBASIC1.81□□□□□ -2.12
CUX2O14529 AL034555.1-201ENST00000604816 211 ntBASIC1.81□□□□□ -2.12
CUX2O14529 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CUX2O14529 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CUX2O14529 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CUX2O14529 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
CUX2O14529 AC068050.1-201ENST00000394891 380 ntBASIC1.8□□□□□ -2.12
CUX2O14529 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
CUX2O14529 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.8□□□□□ -2.12
CUX2O14529 CYCSP23-201ENST00000519781 313 ntBASIC1.8□□□□□ -2.12
CUX2O14529 AC022880.1-201ENST00000534017 973 ntBASIC1.8□□□□□ -2.12
CUX2O14529 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.8□□□□□ -2.12
CUX2O14529 uc_338.34-201ENST00000617467 174 ntBASIC1.8□□□□□ -2.12
CUX2O14529 AC087588.2-201ENST00000617667 426 ntBASIC1.8□□□□□ -2.12
CUX2O14529 AC022079.1-201ENST00000621546 602 ntBASIC1.8□□□□□ -2.12
CUX2O14529 AC130454.1-201ENST00000622948 401 ntBASIC1.8□□□□□ -2.12
CUX2O14529 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CUX2O14529 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CUX2O14529 Y_RNA.359-201ENST00000365498 102 ntBASIC1.79□□□□□ -2.12
CUX2O14529 Y_RNA.582-201ENST00000391023 95 ntBASIC1.79□□□□□ -2.12
CUX2O14529 RNU6-1158P-201ENST00000391167 107 ntBASIC1.79□□□□□ -2.12
CUX2O14529 AL606489.2-201ENST00000433886 234 ntBASIC1.79□□□□□ -2.12
CUX2O14529 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.79□□□□□ -2.12
CUX2O14529 MTCO3P38-201ENST00000468910 766 ntBASIC1.79□□□□□ -2.12
CUX2O14529 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.79□□□□□ -2.12
CUX2O14529 AC016632.1-201ENST00000503994 196 ntBASIC1.79□□□□□ -2.12
CUX2O14529 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.79□□□□□ -2.12
CUX2O14529 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.79□□□□□ -2.12
CUX2O14529 MIR4299-201ENST00000577899 72 ntBASIC1.79□□□□□ -2.12
CUX2O14529 CYP2C61P-201ENST00000604072 290 ntBASIC1.79□□□□□ -2.12
CUX2O14529 Y_RNA.381-201ENST00000365666 102 ntBASIC1.78□□□□□ -2.12
CUX2O14529 Y_RNA.481-201ENST00000384373 102 ntBASIC1.78□□□□□ -2.12
CUX2O14529 SNORD37.1-201ENST00000390968 65 ntBASIC1.78□□□□□ -2.12
CUX2O14529 SNORA12-201ENST00000391162 147 ntBASIC1.78□□□□□ -2.12
CUX2O14529 AL357139.1-201ENST00000407792 426 ntBASIC1.78□□□□□ -2.12
CUX2O14529 MTCO2P19-201ENST00000427513 598 ntBASIC1.78□□□□□ -2.12
CUX2O14529 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.78□□□□□ -2.12
CUX2O14529 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.78□□□□□ -2.12
CUX2O14529 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.78□□□□□ -2.12
CUX2O14529 RNU6-1037P-201ENST00000459571 107 ntBASIC1.78□□□□□ -2.12
CUX2O14529 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.78□□□□□ -2.12
CUX2O14529 HMGB1P29-201ENST00000505659 499 ntBASIC1.78□□□□□ -2.12
CUX2O14529 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
CUX2O14529 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
CUX2O14529 Y_RNA.99-201ENST00000363138 105 ntBASIC1.77□□□□□ -2.13
CUX2O14529 RNU4-66P-201ENST00000365199 138 ntBASIC1.77□□□□□ -2.13
CUX2O14529 RNU6-438P-201ENST00000365561 103 ntBASIC1.77□□□□□ -2.13
CUX2O14529 Y_RNA.518-201ENST00000384552 113 ntBASIC1.77□□□□□ -2.13
CUX2O14529 DEFB108C-201ENST00000400154 252 ntBASIC1.77□□□□□ -2.13
CUX2O14529 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
CUX2O14529 MIR1197-201ENST00000408818 88 ntBASIC1.77□□□□□ -2.13
CUX2O14529 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CUX2O14529 AC244636.1-201ENST00000421152 228 ntBASIC1.77□□□□□ -2.13
CUX2O14529 AL133396.1-201ENST00000432048 687 ntBASIC1.77□□□□□ -2.13
CUX2O14529 AC073415.1-201ENST00000449240 153 ntBASIC1.77□□□□□ -2.13
CUX2O14529 RNU7-180P-201ENST00000459240 63 ntBASIC1.77□□□□□ -2.13
CUX2O14529 AC008628.2-201ENST00000502605 298 ntBASIC1.77□□□□□ -2.13
CUX2O14529 RNA5SP401-201ENST00000515920 127 ntBASIC1.77□□□□□ -2.13
CUX2O14529 AL109918.3-201ENST00000603072 338 ntBASIC1.77□□□□□ -2.13
CUX2O14529 HULC.1-201ENST00000612720 240 ntBASIC1.77□□□□□ -2.13
CUX2O14529 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.77□□□□□ -2.13
CUX2O14529 AC092268.1-201ENST00000342691 405 ntBASIC1.76□□□□□ -2.13
CUX2O14529 RNU6-1164P-201ENST00000364428 107 ntBASIC1.76□□□□□ -2.13
CUX2O14529 Y_RNA.504-201ENST00000384481 104 ntBASIC1.76□□□□□ -2.13
CUX2O14529 RNU4-55P-201ENST00000410731 137 ntBASIC1.76□□□□□ -2.13
CUX2O14529 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.76□□□□□ -2.13
CUX2O14529 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.76□□□□□ -2.13
CUX2O14529 TPTE2P5-203ENST00000458118 728 ntBASIC1.76□□□□□ -2.13
CUX2O14529 SRRM1P2-201ENST00000464531 1192 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.76□□□□□ -2.13
CUX2O14529 MTND2P38-201ENST00000522536 667 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AP003034.1-201ENST00000534621 422 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.76□□□□□ -2.13
CUX2O14529 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.76□□□□□ -2.13
CUX2O14529 AC008749.1-201ENST00000597650 306 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AC110760.3-201ENST00000598794 467 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AC017083.3-201ENST00000609955 700 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AC009509.4-201ENST00000619202 509 ntBASIC1.76□□□□□ -2.13
CUX2O14529 AC139792.3-201ENST00000623525 224 ntBASIC1.76□□□□□ -2.13
CUX2O14529 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.76□□□□□ -2.13
CUX2O14529 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms