Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 Y_RNA.269-201ENST00000364685 89 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 RNU6-933P-201ENST00000384424 107 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 RNU1-57P-201ENST00000384491 166 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 Y_RNA.506-201ENST00000384494 102 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 RNU6-325P-201ENST00000411132 105 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 AC112771.1-201ENST00000463581 102 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 AC115990.1-201ENST00000526957 301 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 AL713866.2-201ENST00000603579 219 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 MIR3976-201ENST00000606807 139 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 AC132825.6-201ENST00000638861 357 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM38O00635 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM38O00635 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM38O00635 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TRIM38O00635 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM38O00635 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM38O00635 AL391987.6-201ENST00000305671 199 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 Y_RNA.277-201ENST00000364754 102 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 SNORA26.7-201ENST00000391288 122 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 RPL23AP95-201ENST00000426806 265 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 AC104332.2-201ENST00000429959 156 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 RPL9P9-202ENST00000466501 579 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 AC117440.1-201ENST00000474107 571 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 RN7SKP132-201ENST00000516001 208 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 RNA5SP367-201ENST00000516557 118 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 RNU6-612P-201ENST00000516909 102 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 AC144568.1-201ENST00000520139 137 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 DEFB108E-201ENST00000524692 240 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 AC107016.2-201ENST00000547968 190 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 AC105245.1-201ENST00000581934 244 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 MIR4273-201ENST00000582824 84 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 RPS29P30-201ENST00000600975 111 ntBASIC2.95□□□□□ -1.94
TRIM38O00635 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM38O00635 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM38O00635 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM38O00635 Y_RNA.54-201ENST00000362766 105 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RNU6-227P-201ENST00000362865 103 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RNU6-529P-201ENST00000363383 104 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 Y_RNA.200-201ENST00000364018 102 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RNA5SP240-201ENST00000365355 128 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 Y_RNA.352-201ENST00000365439 102 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM38O00635 MIR544A-201ENST00000384855 91 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 MIR186-201ENST00000384988 86 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RN7SKP61-201ENST00000410642 295 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM38O00635 EIF4EP4-201ENST00000424916 578 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RPL30P4-201ENST00000429309 333 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 AC092423.1-201ENST00000430165 186 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM38O00635 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM38O00635 RPL39P29-201ENST00000447779 157 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RN7SL429P-201ENST00000479090 223 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RN7SL489P-201ENST00000486185 223 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RN7SL327P-201ENST00000488659 223 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM38O00635 ACA59.1-201ENST00000515966 143 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RNU4-71P-201ENST00000516258 113 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RNU6-911P-201ENST00000516523 104 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM38O00635 MIR4643-201ENST00000577473 78 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 MIR5701-3-201ENST00000578890 82 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 MIR3199-1-201ENST00000582434 88 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 MIR5701-1-201ENST00000585138 82 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 ELOCP29-201ENST00000588193 334 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 AC069294.1-201ENST00000608397 350 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 MIR5701-2-201ENST00000615634 82 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 RN7SL853P-201ENST00000617250 223 ntBASIC2.94□□□□□ -1.94
TRIM38O00635 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM38O00635 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRIM38O00635 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM38O00635 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM38O00635 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM38O00635 Y_RNA.16-201ENST00000362421 102 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 SNORD32A-201ENST00000364805 84 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 RNA5SP126-201ENST00000365092 109 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 U8.8-201ENST00000365399 135 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 Y_RNA.458-201ENST00000384240 102 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 MIR628-201ENST00000385229 95 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 Y_RNA.592-201ENST00000410274 109 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 RNU6-1140P-201ENST00000410517 106 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM38O00635 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM38O00635 AL138752.1-201ENST00000452964 351 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM38O00635 AC023141.11-201ENST00000508864 202 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 AC067942.3-201ENST00000512025 362 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 RNA5SP76-201ENST00000516277 87 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 Y_RNA.683-201ENST00000516508 93 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 CBX3P4-201ENST00000538909 354 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM38O00635 AC136932.1-201ENST00000574771 208 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 AL356280.1-201ENST00000603614 379 ntBASIC2.93□□□□□ -1.94
TRIM38O00635 AL449363.1-201ENST00000617815 186 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms