Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL390123.1-201ENST00000603216 237 ntBASIC0.5□□□□□ -2.33
SDCBPO00560 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.5□□□□□ -2.33
SDCBPO00560 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
SDCBPO00560 U6.108-201ENST00000637764 58 ntBASIC0.5□□□□□ -2.33
SDCBPO00560 AC006927.3-201ENST00000638789 384 ntBASIC0.5□□□□□ -2.33
SDCBPO00560 RNU6-562P-201ENST00000362731 107 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RNU6-74P-201ENST00000384235 107 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RNU6-505P-201ENST00000384427 107 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RNU6-1031P-201ENST00000384773 107 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 MIR549A-201ENST00000385268 96 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RNU6-1093P-201ENST00000391194 107 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC063976.4-201ENST00000421971 163 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.49□□□□□ -2.33
SDCBPO00560 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.49□□□□□ -2.33
SDCBPO00560 RPS26P48-201ENST00000491713 339 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC010486.2-201ENST00000505572 483 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RNU2-69P-201ENST00000516061 100 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RNU6-922P-201ENST00000516753 99 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AL590705.4-201ENST00000532209 134 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.49□□□□□ -2.33
SDCBPO00560 AGGF1P4-201ENST00000568249 801 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC091805.2-201ENST00000603848 235 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 RPL17P51-201ENST00000605218 238 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC064807.4-201ENST00000607201 407 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 MIR6504-201ENST00000613520 61 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 MIR8070-201ENST00000616510 88 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 AC022418.1-201ENST00000624118 445 ntBASIC0.49□□□□□ -2.33
SDCBPO00560 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.49□□□□□ -2.33
SDCBPO00560 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SDCBPO00560 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SDCBPO00560 Y_RNA.4-201ENST00000362333 112 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 Y_RNA.191-201ENST00000363972 113 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 SNORA72.2-201ENST00000365028 127 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 SNORD114-24-201ENST00000365029 72 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 RNU6-969P-201ENST00000383900 105 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 RNU6-1054P-201ENST00000411293 104 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 SSR1P2-201ENST00000415208 787 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AC016909.1-201ENST00000415916 166 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.48□□□□□ -2.33
SDCBPO00560 MTCO2P34-201ENST00000421994 607 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.48□□□□□ -2.33
SDCBPO00560 ZNF114P1-201ENST00000453500 292 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 SNRPFP3-201ENST00000457792 225 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 SNORD79.1-201ENST00000516069 84 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AL121579.1-201ENST00000555129 305 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AC008751.2-201ENST00000597885 980 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AC080078.2-201ENST00000603766 501 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AC022217.4-201ENST00000604389 163 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AL133173.2-201ENST00000614270 90 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AC106754.2-201ENST00000623006 233 ntBASIC0.48□□□□□ -2.33
SDCBPO00560 AC023934.1-201ENST00000574529 2389 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
SDCBPO00560 Y_RNA.164-201ENST00000363709 102 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNY1P12-201ENST00000364251 105 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU6-1029P-201ENST00000384109 107 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU6-975P-201ENST00000384296 105 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU6-1235P-201ENST00000384559 107 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AF228730.1-201ENST00000397972 663 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 MIR300-201ENST00000401138 83 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU6-195P-201ENST00000411352 109 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RPS26P5-201ENST00000418544 335 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC098592.1-201ENST00000419352 333 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.47□□□□□ -2.33
SDCBPO00560 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.47□□□□□ -2.33
SDCBPO00560 AL596276.1-201ENST00000434465 418 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC245047.7-201ENST00000440265 293 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC004854.1-201ENST00000440356 349 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.47□□□□□ -2.33
SDCBPO00560 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RPS29P15-201ENST00000458329 171 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU6-498P-201ENST00000459468 107 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.47□□□□□ -2.33
SDCBPO00560 AC079382.1-201ENST00000493346 557 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.47□□□□□ -2.33
SDCBPO00560 RPL39P5-202ENST00000512505 151 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 FABP5P5-201ENST00000515537 406 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU2-34P-201ENST00000516534 121 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU6-567P-201ENST00000516746 107 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC090142.3-201ENST00000519012 385 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.47□□□□□ -2.33
SDCBPO00560 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.47□□□□□ -2.33
SDCBPO00560 MTATP6P3-201ENST00000581686 676 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AP000240.1-201ENST00000609910 452 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AC006001.4-201ENST00000622243 395 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 AL603839.4-201ENST00000624658 1005 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 U6.114-201ENST00000636407 96 ntBASIC0.47□□□□□ -2.33
SDCBPO00560 RNU6-266P-201ENST00000364225 107 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 SNORA25.9-201ENST00000365087 128 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 RNU6-393P-201ENST00000384475 107 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 RNU6-1127P-201ENST00000384580 107 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 MIR1-2-201ENST00000384961 85 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 SNORD41-201ENST00000386967 70 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
SDCBPO00560 SNORD70.1-201ENST00000391007 85 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 AC090960.1-201ENST00000421072 306 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 AC005002.2-201ENST00000438228 269 ntBASIC0.46□□□□□ -2.34
SDCBPO00560 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.46□□□□□ -2.34
SDCBPO00560 SNORA31.4-201ENST00000516049 129 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms