Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 AC097372.5-201ENST00000623665 376 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 MIR1295B-201ENST00000636144 60 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 RNU6-289P-201ENST00000364093 107 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 RNU6-417P-201ENST00000384712 107 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 MIR613-201ENST00000385248 95 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 SNORD111-201ENST00000408139 94 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 RNU4-22P-201ENST00000411058 166 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AC092809.3-201ENST00000415453 231 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AL139396.1-201ENST00000421137 167 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.39□□□□□ -2.47
HMGN4O00479 AC243964.1-201ENST00000441814 261 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.39□□□□□ -2.47
HMGN4O00479 AC016717.1-201ENST00000448918 286 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 RPS3AP17-201ENST00000472594 777 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AC025465.4-201ENST00000513422 638 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AP003716.2-201ENST00000528260 108 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 LRRC6P1-201ENST00000532188 885 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AC087883.1-201ENST00000551882 391 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.39□□□□□ -2.47
HMGN4O00479 AC008752.3-201ENST00000588113 712 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AL162424.1-201ENST00000602325 221 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 AC004987.4-201ENST00000603383 338 ntBASIC-0.39□□□□□ -2.47
HMGN4O00479 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
HMGN4O00479 RNU6-78P-201ENST00000362897 107 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 RNU4-56P-201ENST00000364700 142 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 RNU6-384P-201ENST00000364900 104 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 AC083799.1-201ENST00000366451 910 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.4□□□□□ -2.47
HMGN4O00479 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.4□□□□□ -2.47
HMGN4O00479 AC036111.3-201ENST00000526389 112 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.4□□□□□ -2.47
HMGN4O00479 TMF1P1-201ENST00000576058 373 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 MIR3923-201ENST00000579521 83 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 RNU4-5P-201ENST00000607255 135 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 AC103706.2-201ENST00000638080 240 ntBASIC-0.4□□□□□ -2.47
HMGN4O00479 RNU6-545P-201ENST00000362681 104 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 RNU6-190P-201ENST00000384154 102 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 MIR214-201ENST00000385214 110 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 MRPL42P3-201ENST00000401492 326 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 PDCL2P1-201ENST00000419302 352 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 AL590135.1-201ENST00000422215 156 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 AC019205.3-201ENST00000424573 156 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.41□□□□□ -2.48
HMGN4O00479 AC245047.3-201ENST00000429428 127 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 USP9YP28-201ENST00000435142 589 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGN4O00479 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.41□□□□□ -2.48
HMGN4O00479 AC016700.2-201ENST00000446011 156 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGN4O00479 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.41□□□□□ -2.48
HMGN4O00479 AC015911.1-201ENST00000495111 156 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 AC091874.1-201ENST00000511402 339 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGN4O00479 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 SNORD111.1-201ENST00000516421 86 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGN4O00479 DEFB131D-201ENST00000526803 184 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 RPL23AP91-201ENST00000569211 455 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 MIR4300-201ENST00000581016 96 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 MIR3192-201ENST00000584920 77 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.41□□□□□ -2.48
HMGN4O00479 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
HMGN4O00479 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.41□□□□□ -2.48
HMGN4O00479 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.41□□□□□ -2.48
HMGN4O00479 SNORD118-201ENST00000363593 134 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 MIR610-201ENST00000385139 96 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 MIR300-201ENST00000401138 83 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGN4O00479 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.42□□□□□ -2.48
HMGN4O00479 DEFB130D-201ENST00000426866 237 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.42□□□□□ -2.48
HMGN4O00479 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.42□□□□□ -2.48
HMGN4O00479 AC023157.2-201ENST00000540596 141 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 AC146944.4-201ENST00000602697 718 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 AC026585.1-201ENST00000619582 524 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 U6.108-201ENST00000637764 58 ntBASIC-0.42□□□□□ -2.48
HMGN4O00479 AP000568.1-201ENST00000282964 442 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 MIR1-1-201ENST00000362147 71 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 RNU6-527P-201ENST00000363425 104 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.43□□□□□ -2.48
HMGN4O00479 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.43□□□□□ -2.48
HMGN4O00479 MTND4LP7-201ENST00000431728 294 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 HSFY7P-201ENST00000432672 318 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 AL606489.2-201ENST00000433886 234 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 HSFY8P-201ENST00000437934 318 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 AP000542.1-201ENST00000448473 371 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 RNU6-948P-201ENST00000516374 107 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 RNU1-142P-201ENST00000516682 145 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.43□□□□□ -2.48
HMGN4O00479 MTND3P19-201ENST00000603825 345 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 AC112187.2-201ENST00000604345 283 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 AL357075.2-201ENST00000614906 189 ntBASIC-0.43□□□□□ -2.48
HMGN4O00479 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms