Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 SNORA80D-201ENST00000384488 135 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.56□□□□□ -2.5
COL6A5A8TX70 RPL23AP50-201ENST00000434149 455 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-0.56□□□□□ -2.5
COL6A5A8TX70 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AL356057.1-201ENST00000533798 831 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AC011195.1-201ENST00000578177 177 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNY3P9-201ENST00000384727 106 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 MTND2P21-201ENST00000436242 1042 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AC090186.1-201ENST00000605991 572 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 MIR103A2-201ENST00000362154 78 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNA5SP405-201ENST00000363059 114 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU4-28P-201ENST00000364739 141 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 SMIM11P1-201ENST00000369586 178 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-447P-201ENST00000410293 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-355P-201ENST00000410427 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-791P-201ENST00000410467 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-860P-201ENST00000410860 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-177P-201ENST00000411257 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 RNU6-785P-201ENST00000411324 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 SNRPEP8-201ENST00000442866 260 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 MTND2P4-201ENST00000445034 1004 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AC016542.1-201ENST00000608259 493 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 U6.90-201ENST00000614007 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 U6.70-201ENST00000620287 104 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AC006504.8-201ENST00000621046 635 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 AC017037.3-201ENST00000625016 472 ntBASIC-0.57□□□□□ -2.5
COL6A5A8TX70 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.57□□□□□ -2.5
COL6A5A8TX70 SNORA26-201ENST00000391286 122 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 MIR873-201ENST00000401120 77 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 RNU7-21P-201ENST00000459430 62 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.58□□□□□ -2.5
COL6A5A8TX70 RNU6-850P-201ENST00000516934 103 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 RNU1-117P-201ENST00000517041 158 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 snoU83B.1-201ENST00000517136 88 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AL132657.2-201ENST00000564417 358 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC004853.1-201ENST00000604902 698 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC107952.2-201ENST00000606048 486 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC090772.4-201ENST00000623599 362 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 MIR548H1-201ENST00000408610 102 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC010655.3-201ENST00000478818 450 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC008494.2-201ENST00000514544 370 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 RNU6-412P-201ENST00000516434 106 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AC004908.3-201ENST00000610248 625 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 AP000484.1-201ENST00000620067 1252 ntBASIC-0.58□□□□□ -2.5
COL6A5A8TX70 RNU1-76P-201ENST00000362903 159 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AL031281.1-201ENST00000604049 488 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC004223.4-201ENST00000612426 332 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC119674.1-220ENST00000641502 1048 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 U8.15-201ENST00000390947 134 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AL355994.1-201ENST00000424379 260 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 MTND4LP10-201ENST00000435146 291 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.59□□□□□ -2.5
COL6A5A8TX70 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC069257.2-201ENST00000441819 155 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 MTND5P2-201ENST00000442927 1142 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC113398.2-201ENST00000507630 558 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 RBBP4P6-201ENST00000508098 202 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 RNA5SP169-201ENST00000517268 117 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AF235103.2-201ENST00000525753 346 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC124947.2-202ENST00000552735 133 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.59□□□□□ -2.5
COL6A5A8TX70 AC246785.4-201ENST00000605374 287 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 SEPT14P17-201ENST00000617978 177 ntBASIC-0.59□□□□□ -2.5
COL6A5A8TX70 ZNF299P-201ENST00000406845 1804 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC083799.1-201ENST00000366451 910 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 RNU6-811P-201ENST00000384069 107 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 MIR135A2-201ENST00000384854 100 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 RNU2-59P-201ENST00000410482 191 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC133104.1-201ENST00000429100 218 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC113347.3-201ENST00000509113 148 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AL353803.5-201ENST00000599815 141 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms