Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.52□□□□□ -1.53
SPDYE4A6NLX3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 RNU6-1099P-201ENST00000363533 107 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 Y_RNA.221-201ENST00000364248 96 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 Y_RNA.244-201ENST00000364484 109 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 SNORA4.2-201ENST00000365313 147 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 RNU6-1276P-201ENST00000365372 104 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 MIR1183-201ENST00000408856 89 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 FTH1P12-201ENST00000432137 551 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 AC099677.2-201ENST00000436385 175 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 RN7SL814P-201ENST00000487715 300 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 AC140172.1-201ENST00000502928 141 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 RNA5SP367-201ENST00000516557 118 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 RNU7-6P-201ENST00000516845 62 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 RNU6-856P-201ENST00000516959 98 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 AL160290.3-201ENST00000604869 165 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 SNX18P1Y-201ENST00000616231 511 ntBASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPDYE4A6NLX3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 FAM35CP-201ENST00000554755 2470 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 MIR192-201ENST00000384915 110 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 RNA5SP57-201ENST00000459463 123 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 RPL35AP15-201ENST00000468042 339 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 RN7SL481P-201ENST00000477764 299 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 AC008897.1-201ENST00000494006 347 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 AC022254.1-201ENST00000567857 235 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 MIR3683-201ENST00000580847 82 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 AC006111.3-201ENST00000622137 383 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 AP000346.3-201ENST00000622821 210 ntBASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SPDYE4A6NLX3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 SNORD115-28-201ENST00000363931 81 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 RNU6-1083P-201ENST00000384022 107 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 RNU7-61P-201ENST00000515897 61 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 RNU6-341P-201ENST00000516973 96 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 MIR4778-201ENST00000577635 80 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 MIR4691-201ENST00000583764 85 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 MIR378J-201ENST00000611988 109 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 AC087385.3-201ENST00000620477 187 ntBASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.49□□□□□ -1.53
SPDYE4A6NLX3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 Y_RNA.267-201ENST00000364679 109 ntBASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 RNU6-497P-201ENST00000365316 104 ntBASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 Y_RNA.507-201ENST00000384500 99 ntBASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 RNU2-37P-201ENST00000410695 177 ntBASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 AC006441.5-201ENST00000612680 209 ntBASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 MIR6079-201ENST00000635807 62 ntBASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPDYE4A6NLX3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 Y_RNA.37-201ENST00000362606 108 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 SNORA33-201ENST00000363664 130 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 RNA5SP28-201ENST00000363841 119 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 RNA5SP90-201ENST00000364801 99 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 MIR522-201ENST00000385071 87 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 RPS29P33-201ENST00000456717 146 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 AC091826.1-201ENST00000514065 313 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 AC091544.4-201ENST00000555268 342 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 MIR4697-201ENST00000582977 78 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 MIR6810-201ENST00000622701 70 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 CR392039.5-201ENST00000623201 510 ntBASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SPDYE4A6NLX3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms