Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MIR7107-201ENST00000611489 80 ntBASIC-1.03□□□□□ -2.57
LINC01546A6NGU7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.03□□□□□ -2.57
LINC01546A6NGU7 U6.99-201ENST00000637524 83 ntBASIC-1.03□□□□□ -2.57
LINC01546A6NGU7 AC017104.5-201ENST00000637647 639 ntBASIC-1.03□□□□□ -2.57
LINC01546A6NGU7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 MIR649-201ENST00000384843 97 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 SNORD100-201ENST00000408573 76 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 FCF1P9-201ENST00000412546 282 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 MTCO1P5-201ENST00000433573 344 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 DEFB131D-201ENST00000526803 184 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 DEFB131C-201ENST00000528817 165 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 DEFB130C-202ENST00000530001 230 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 MIR378F-201ENST00000578143 78 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 MIR3925-201ENST00000584674 77 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 AC022022.2-201ENST00000602989 360 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 SUMO2P14-201ENST00000604488 293 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 AL356596.1-201ENST00000624230 379 ntBASIC-1.04□□□□□ -2.58
LINC01546A6NGU7 MTND5P31-201ENST00000419366 1374 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 U8.5-201ENST00000364528 136 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 MIR873-201ENST00000401120 77 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 ISCA1P1-201ENST00000426679 387 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 SNRPEP8-201ENST00000442866 260 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 AL133217.1-201ENST00000450980 425 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 SNORA18.7-201ENST00000516910 131 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 RNU2-46P-201ENST00000517038 113 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 MTND2P7-201ENST00000521337 640 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 AC023442.1-201ENST00000531247 422 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 MIR4778-201ENST00000577635 80 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 MIR3152-201ENST00000579801 74 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 MIR548AD-201ENST00000584780 82 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 MIR4499-201ENST00000584834 69 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 RNU1-29P-201ENST00000606574 126 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 AC093788.1-201ENST00000609356 927 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 MIR6507-201ENST00000613630 70 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 AC122133.1-201ENST00000613964 233 ntBASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.05□□□□□ -2.58
LINC01546A6NGU7 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 RNU1-76P-201ENST00000362903 159 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 SNORD114-25-201ENST00000363742 72 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 RNU6-24P-201ENST00000384440 107 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 AC060773.1-201ENST00000421698 310 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 SNORD57-201ENST00000448188 72 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 OR6C5P-201ENST00000452388 923 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 TPT1P7-201ENST00000458300 517 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 RNU6-274P-201ENST00000459566 107 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 RN7SKP19-201ENST00000516016 252 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 RNY1P9-201ENST00000532431 109 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 MRPS36P4-201ENST00000534436 298 ntBASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.06□□□□□ -2.58
LINC01546A6NGU7 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 RNU6-199P-201ENST00000362954 107 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 MIR29B2-201ENST00000385055 81 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 MIR501-201ENST00000390204 84 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 SNORA12.2-201ENST00000391040 156 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 RPS20P2-201ENST00000402520 389 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 TAF13P2-201ENST00000416876 286 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 AL451054.2-201ENST00000420896 202 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 AC093019.1-201ENST00000443135 252 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 MED28P2-201ENST00000475771 317 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 RNU6-63P-201ENST00000516690 95 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 LSM6P2-201ENST00000552208 177 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 MIR4752-201ENST00000579672 72 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 AC090186.1-201ENST00000605991 572 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 uc_338.19-201ENST00000616808 99 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 DLEU2_6.2-201ENST00000620994 136 ntBASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.07□□□□□ -2.58
LINC01546A6NGU7 RNU6-655P-201ENST00000362858 107 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 RNU4-32P-201ENST00000363404 141 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 RNU4-16P-201ENST00000364737 141 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 SNORD32A-201ENST00000364805 84 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 SNORA2.2-201ENST00000365473 135 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 RNU6-921P-201ENST00000384361 107 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 MIR660-201ENST00000385235 97 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 MTCO1P21-201ENST00000416634 589 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 MTATP6P27-201ENST00000416987 621 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 AC010153.1-201ENST00000432862 727 ntBASIC-1.08□□□□□ -2.58
LINC01546A6NGU7 USP9YP22-201ENST00000438971 294 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms