Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AL162395.1-201ENST00000457882 422 ntBASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 AC098869.1-201ENST00000481627 292 ntBASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 HMGB1P29-201ENST00000505659 499 ntBASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 AC069431.2-201ENST00000604149 1099 ntBASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 AL607023.1-201ENST00000620045 248 ntBASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 MIR8054-201ENST00000620877 86 ntBASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 U6.108-201ENST00000637764 58 ntBASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
TRBV6-4A0A1B0GX49 ELL2P3-201ENST00000457883 1602 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 Y_RNA.164-201ENST00000363709 102 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-715P-201ENST00000365204 103 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-1335P-201ENST00000365426 107 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-975P-201ENST00000384296 105 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNA5SP323-201ENST00000391094 133 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL355796.1-201ENST00000406706 323 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RN7SKP200-201ENST00000410564 320 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC090960.1-201ENST00000421072 306 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU7-21P-201ENST00000459430 62 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 SRRM1P2-201ENST00000464531 1192 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC010486.2-201ENST00000505572 483 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC116562.3-201ENST00000506136 177 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-1146P-201ENST00000516282 102 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-229P-201ENST00000516614 102 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-1223P-201ENST00000517124 104 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-1220P-201ENST00000517126 108 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC068587.5-201ENST00000528506 175 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC006001.4-201ENST00000622243 395 ntBASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU4-76P-201ENST00000364509 141 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 MIR549A-201ENST00000385268 96 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 MIR653-201ENST00000385279 96 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-550P-201ENST00000391057 101 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU2-8P-201ENST00000410727 190 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 RPEP5-201ENST00000441137 268 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC113410.1-201ENST00000505029 247 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-1178P-201ENST00000516674 107 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC022616.3-201ENST00000523940 148 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC103996.1-201ENST00000555468 102 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL137100.2-201ENST00000555786 315 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC091489.2-201ENST00000566263 604 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 Z99497.2-201ENST00000603634 310 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AP001836.1-201ENST00000604675 523 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 MIR6513-201ENST00000621188 64 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL136221.1-201ENST00000621449 509 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL513423.1-201ENST00000621695 132 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL078595.3-201ENST00000623815 1166 ntBASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.26□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-827P-201ENST00000365553 106 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-945P-201ENST00000383947 107 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-440P-201ENST00000390882 105 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 SNORA75.2-201ENST00000391138 150 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 SNORA75.3-201ENST00000391231 150 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 MRPL42P2-201ENST00000403169 426 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 Y_RNA.608-201ENST00000410647 95 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 AK3P2-201ENST00000507976 429 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU4-57P-201ENST00000515980 135 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 SCARNA24.1-201ENST00000516465 137 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC018659.1-201ENST00000551083 169 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 PRELID3BP2-201ENST00000605362 201 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL031667.3-201ENST00000620124 655 ntBASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.25□□□□□ -2.37
TRBV6-4A0A1B0GX49 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 Y_RNA.18-201ENST00000362461 102 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU6-636P-201ENST00000384598 107 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 MIR660-201ENST00000385235 97 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 MIR1253-201ENST00000408273 105 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC016909.1-201ENST00000415916 166 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC244023.1-201ENST00000426884 112 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC098934.3-201ENST00000430450 190 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 FABP5P4-201ENST00000437203 171 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 AC005002.2-201ENST00000438228 269 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 AL031274.1-201ENST00000450334 232 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 RNU7-90P-201ENST00000459216 62 ntBASIC0.24□□□□□ -2.37
TRBV6-4A0A1B0GX49 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms