Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 SNORD3E-202ENST00000627253 216 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 MTND4P5-201ENST00000435821 1374 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 Y_RNA.287-201ENST00000364853 94 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-975P-201ENST00000384296 105 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-809P-201ENST00000384461 107 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 Y_RNA.576-201ENST00000384781 102 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 SNORA12.1-201ENST00000390873 148 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AL596276.1-201ENST00000434465 418 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AL606517.2-201ENST00000442855 241 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AL162395.1-201ENST00000457882 422 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AC116347.2-201ENST00000514912 523 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-1146P-201ENST00000516282 102 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-405P-201ENST00000516637 110 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 RNA5SP480-201ENST00000516840 109 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 DEFB131C-201ENST00000528817 165 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AC069431.2-201ENST00000604149 1099 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 PVT1_3.1-201ENST00000620853 95 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AL513423.1-201ENST00000621695 132 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AL359697.1-201ENST00000624879 587 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 U6.108-201ENST00000637764 58 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 AC013437.2-201ENST00000639587 677 ntBASIC0.36□□□□□ -2.35
TRAV3A0A0B4J244 MTND5P17-201ENST00000418405 1603 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-179P-201ENST00000363350 107 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 SNORD114-26-201ENST00000363543 72 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 SNORD115-7-201ENST00000365306 82 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 SNORD41-201ENST00000386967 70 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 RNA5SP109-201ENST00000391010 116 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 MIR936-201ENST00000401264 98 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 Y_RNA.608-201ENST00000410647 95 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC012306.1-201ENST00000423267 114 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 CETN4P-201ENST00000432407 469 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 MTCYBP1-201ENST00000454315 1119 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AP003181.2-201ENST00000528941 181 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AL359999.1-201ENST00000604513 294 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC104458.1-201ENST00000608243 463 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC138749.5-201ENST00000611461 208 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC116165.2-201ENST00000616705 206 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AL445984.1-201ENST00000637834 659 ntBASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV3A0A0B4J244 AC023934.1-201ENST00000574529 2389 ntBASIC0.34□□□□□ -2.35
TRAV3A0A0B4J244 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TRAV3A0A0B4J244 AL589743.1-201ENST00000551932 2712 ntBASIC0.34□□□□□ -2.35
TRAV3A0A0B4J244 U3.8-201ENST00000363675 217 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 RNU4-12P-201ENST00000365233 139 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-641P-201ENST00000384006 107 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 CDK8P2-201ENST00000415020 547 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AC119618.1-201ENST00000434191 222 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 MTATP6P16-201ENST00000434543 526 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 GAPDHP17-201ENST00000449858 1001 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 RNU7-21P-201ENST00000459430 62 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 MTCO2P6-201ENST00000463134 685 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 SNRPGP7-201ENST00000469016 106 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-496P-201ENST00000516145 99 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 RNU4-54P-201ENST00000516428 129 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AC016256.1-201ENST00000547971 354 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AC022217.4-201ENST00000604389 163 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AP001836.1-201ENST00000604675 523 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AL139418.1-201ENST00000613613 177 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 AC010487.4-201ENST00000637027 61 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 ELL2P3-201ENST00000457883 1602 ntBASIC0.34□□□□□ -2.36
TRAV3A0A0B4J244 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 RNY1P4-201ENST00000384595 115 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 RNU6-1242P-201ENST00000391052 103 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 MIR942-201ENST00000401111 86 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 MIR208B-201ENST00000401172 77 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 RN7SKP200-201ENST00000410564 320 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AL035398.1-201ENST00000430869 322 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC084290.1-201ENST00000434995 374 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AL031313.1-201ENST00000448435 256 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC116562.3-201ENST00000506136 177 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC091874.1-201ENST00000511402 339 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC022616.3-201ENST00000523940 148 ntBASIC0.33□□□□□ -2.36
TRAV3A0A0B4J244 AC068587.5-201ENST00000528506 175 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms