Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIR1283-1-201ENST00000408494 87 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 VPS26BP1-201ENST00000417155 755 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC078809.1-201ENST00000427601 140 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC073261.1-201ENST00000429409 121 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RPL23AP30-201ENST00000432419 501 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RPL37P21-201ENST00000435890 276 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 MTCO2P7-201ENST00000446518 666 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 TPT1P7-201ENST00000458300 517 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RBBP4P6-201ENST00000508098 202 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-948P-201ENST00000516374 107 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC036111.3-201ENST00000526389 112 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AP002453.2-201ENST00000533503 320 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AL162424.1-201ENST00000602325 221 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 DEFB131E-202ENST00000602581 683 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC078795.3-201ENST00000602913 472 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC009994.1-201ENST00000606889 253 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-94P-201ENST00000607728 107 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC104458.1-201ENST00000608243 463 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 AC007014.2-201ENST00000615581 479 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 FRG1KP-201ENST00000623592 341 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-236P-201ENST00000363886 106 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU4-56P-201ENST00000364700 142 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR573-201ENST00000384964 99 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR518E-201ENST00000385252 88 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC093019.1-201ENST00000443135 252 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AF235103.2-201ENST00000525753 346 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC004584.2-201ENST00000570407 410 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC234772.3-201ENST00000602277 528 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC104408.1-201ENST00000605241 170 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC005520.5-201ENST00000613926 164 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 AC015726.2-201ENST00000620112 122 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR6079-201ENST00000635807 62 ntBASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.24□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-222P-201ENST00000362438 107 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-371P-201ENST00000364283 108 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-975P-201ENST00000384296 105 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 SNORD111-201ENST00000408139 94 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR1185-1-201ENST00000408598 86 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 SNORA40.8-201ENST00000411034 126 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 ELOCP17-201ENST00000414751 326 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC245047.3-201ENST00000429428 127 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AL360271.2-201ENST00000447710 161 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC016717.1-201ENST00000448918 286 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 RPL23AP54-201ENST00000495129 419 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC104136.1-201ENST00000512969 394 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC116347.2-201ENST00000514912 523 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC026616.1-201ENST00000523157 525 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC141557.1-201ENST00000540982 400 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC090517.1-201ENST00000569307 266 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 RN7SL793P-201ENST00000583259 296 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AC099785.1-201ENST00000605697 437 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AL359547.2-201ENST00000615810 418 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AL450472.1-202ENST00000637286 180 ntBASIC-0.25□□□□□ -2.45
TRAV1-2A0A0B4J238 AP000568.1-201ENST00000282964 442 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR330-201ENST00000362196 94 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 snoZ40.1-201ENST00000364540 72 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 RNA5SP517-201ENST00000364724 117 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 RNY3P13-201ENST00000365542 102 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-692P-201ENST00000384496 107 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR320C1-201ENST00000408566 88 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-57P-201ENST00000411348 103 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 AC005002.2-201ENST00000438228 269 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 AC112206.4-201ENST00000515142 405 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 SNORA25.12-201ENST00000516202 82 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU1-142P-201ENST00000516682 145 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 DEFB131C-201ENST00000528817 165 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms