Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 AC073901.1-201ENST00000462471 408 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 RN7SL499P-201ENST00000481141 276 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 AC022868.1-201ENST00000517767 391 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 AL390123.1-201ENST00000603216 237 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 AC005296.1-201ENST00000616145 209 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.95□□□□□ -1.94
PCDHA3Q9Y5H8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AC080128.1-201ENST00000474389 1917 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 RNU1-76P-201ENST00000362903 159 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 RNA5SP374-201ENST00000362939 125 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 Y_RNA.152-201ENST00000363578 100 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 SNORA51.11-201ENST00000384442 131 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 MTND3P2-201ENST00000438452 342 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AC073910.1-201ENST00000445047 438 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AC083906.5-201ENST00000503722 328 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 SCGB1D5P-201ENST00000515134 247 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-56P-201ENST00000516986 93 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AC034114.1-201ENST00000520293 285 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AP002404.1-201ENST00000532005 451 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 HSPE1P20-201ENST00000538133 289 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 UBL5P4-201ENST00000562584 236 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AL670379.2-201ENST00000604983 252 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 AC069294.1-201ENST00000608397 350 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.94□□□□□ -1.94
PCDHA3Q9Y5H8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AC138915.1-201ENST00000565427 1685 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-708P-201ENST00000384217 107 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-318P-201ENST00000384283 103 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 SNORA46.1-201ENST00000391069 153 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AL139281.1-201ENST00000422120 335 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 SDAD1P3-201ENST00000427380 333 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AC112220.1-201ENST00000434628 355 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 FCF1P4-201ENST00000448326 183 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AC140059.1-201ENST00000489238 361 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 SCARNA13-201ENST00000516672 275 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AC026470.2-201ENST00000561492 181 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AC105245.1-201ENST00000581934 244 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 MIR3199-1-201ENST00000582434 88 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 MIR4325-201ENST00000583049 90 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 SNRPGP20-201ENST00000604477 205 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 PRR13P7-201ENST00000605538 430 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AL121655.1-201ENST00000605811 308 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 AL162274.2-201ENST00000614406 332 ntBASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHA3Q9Y5H8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 ZNF204P-201ENST00000416749 2397 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-879P-201ENST00000364328 108 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 Y_RNA.276-201ENST00000364732 109 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 MIR218-1-201ENST00000384999 110 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 MIR320B2-201ENST00000408479 138 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 AC091826.1-201ENST00000514065 313 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-1012P-201ENST00000516606 109 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 RN7SKP49-201ENST00000516675 260 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 COX6CP5-201ENST00000527162 228 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 MIR5695-201ENST00000579717 85 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 MIR3616-201ENST00000584070 92 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 ZNF861P-201ENST00000588126 639 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 AC125232.2-201ENST00000592457 143 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 AL713866.2-201ENST00000603579 219 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 RPL17P51-201ENST00000605218 238 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 AC010205.1-201ENST00000616668 449 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 AC008121.3-201ENST00000618726 433 ntBASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHA3Q9Y5H8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 MIR422A-201ENST00000362286 90 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-1309P-201ENST00000363305 108 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-873P-201ENST00000363833 107 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 SNORD32B-201ENST00000364460 84 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 RNU6-1145P-201ENST00000384246 107 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 MIR329-1-201ENST00000385028 80 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 SNORA48.2-201ENST00000390926 124 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 NDUFB4P4-201ENST00000404822 243 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 DPH3P2-201ENST00000422618 250 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 AC010655.3-201ENST00000478818 450 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 AC010469.2-201ENST00000496412 480 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms